Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-1A0N8R0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-1A0N8R0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-1A0N8R0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-1A0N8R0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trav12d-1A0N8R0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-1A0N8R0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Gm18958-201ENSMUST00000174258 762 ntBASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-1A0N8R0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12d-1A0N8R0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12d-1A0N8R0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12d-1A0N8R0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav12d-1A0N8R0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Trav12d-1A0N8R0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12d-1A0N8R0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12d-1A0N8R0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav12d-1A0N8R0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12d-1A0N8R0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12d-1A0N8R0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12d-1A0N8R0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Gm15378-201ENSMUST00000121894 207 ntBASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Gm38027-201ENSMUST00000192315 235 ntBASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12d-1A0N8R0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms