Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv8-27A0A0G2JF28 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Igkv8-27A0A0G2JF28 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv8-27A0A0G2JF28 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv8-27A0A0G2JF28 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv8-27A0A0G2JF28 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv8-27A0A0G2JF28 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv8-27A0A0G2JF28 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv8-27A0A0G2JF28 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv8-27A0A0G2JF28 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv8-27A0A0G2JF28 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv8-27A0A0G2JF28 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 AC107711.5-202ENSMUST00000226429 702 ntBASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-27A0A0G2JF28 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-27A0A0G2JF28 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-27A0A0G2JF28 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-27A0A0G2JF28 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-27A0A0G2JF28 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-27A0A0G2JF28 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-27A0A0G2JF28 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-27A0A0G2JF28 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-27A0A0G2JF28 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gm43173-201ENSMUST00000202246 593 ntBASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gm40848-201ENSMUST00000221998 324 ntBASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-27A0A0G2JF28 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Wdr70-203ENSMUST00000227371 1130 ntBASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms