Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-28A0A0G2JE47 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm5874-201ENSMUST00000096101 508 ntBASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-28A0A0G2JE47 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Igkv8-28A0A0G2JE47 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms