Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Gm15375-201ENSMUST00000119510 849 ntBASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Gm27275-201ENSMUST00000184318 272 ntBASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Gm29791-202ENSMUST00000207888 369 ntBASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Mtag2-201ENSMUST00000058665 714 ntBASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv1A0A0B4J1G7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Mir2861-201ENSMUST00000175539 82 ntBASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv1A0A0B4J1G7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Gm12527-201ENSMUST00000117967 564 ntBASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Gm37856-201ENSMUST00000191634 999 ntBASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv1A0A0B4J1G7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms