Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv23A0A0A6YWQ1 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.24□□□□□ -0.13
Trbv23A0A0A6YWQ1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv23A0A0A6YWQ1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv23A0A0A6YWQ1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trbv23A0A0A6YWQ1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv23A0A0A6YWQ1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Asic1-205ENSMUST00000228185 1818 ntBASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Gm13168-201ENSMUST00000121771 632 ntBASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv23A0A0A6YWQ1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Mir2861-201ENSMUST00000175539 82 ntBASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv23A0A0A6YWQ1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Gm27011-201ENSMUST00000182352 972 ntBASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Gm8520-201ENSMUST00000186517 868 ntBASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv23A0A0A6YWQ1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv23A0A0A6YWQ1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv23A0A0A6YWQ1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv23A0A0A6YWQ1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv23A0A0A6YWQ1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv23A0A0A6YWQ1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv23A0A0A6YWQ1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv23A0A0A6YWQ1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Gm10418-201ENSMUST00000100943 576 ntBASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv23A0A0A6YWQ1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms