Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 SNORD116-12-201ENST00000384468 92 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 DNAJC19P6-201ENST00000401853 280 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AC027644.1-201ENST00000419595 298 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 YWHAEP5-201ENST00000431545 765 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AC084290.1-201ENST00000434995 374 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 NANOGP2-201ENST00000435391 727 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AC104306.1-201ENST00000449702 371 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AL162388.1-201ENST00000450912 352 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 CDC42P1-201ENST00000456658 548 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 RPL23AP2-201ENST00000471227 466 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AC079203.1-201ENST00000487972 404 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AC005351.1-201ENST00000511152 786 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AC083923.1-201ENST00000523708 376 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 LRRC6P1-201ENST00000532188 885 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 MTCO2P15-201ENST00000532655 656 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 MTND4P33-201ENST00000556706 766 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AC095057.3-201ENST00000567102 1157 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AC136624.4-201ENST00000573044 370 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AC092954.1-201ENST00000609121 445 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AP003485.2-201ENST00000623636 610 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 AC055839.1-201ENST00000634467 498 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 U6.107-201ENST00000637108 79 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 BX649567.1-201ENST00000642071 1134 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 GTF2H2B-203ENST00000508065 1432 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC009951.1-201ENST00000623674 2614 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 RNU1-87P-201ENST00000363727 170 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC119751.3-201ENST00000399720 670 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 HDGFP1-201ENST00000405943 252 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 BTF3P8-201ENST00000414577 526 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AL356320.2-201ENST00000417263 507 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AL161631.1-201ENST00000417933 486 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 COX6B1P7-201ENST00000430845 235 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 MTCYBP42-201ENST00000444653 1130 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 RPL7P31-201ENST00000450192 724 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 ABCF2P2-201ENST00000450549 296 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 VN1R40P-201ENST00000455196 941 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC104164.2-201ENST00000496953 495 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 HPRT1P2-201ENST00000505250 544 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 PRELID3BP4-201ENST00000515476 571 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 PHBP17-201ENST00000528576 541 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 DEFB130C-202ENST00000530001 230 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 MRPS36P5-201ENST00000551909 298 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 ATP5F1P7-201ENST00000567330 760 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 MTND3P13-201ENST00000574391 343 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC004223.2-201ENST00000590309 544 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 PCNAP1-202ENST00000595299 752 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC009237.15-201ENST00000610252 501 ntBASIC4.55□□□□□ -1.68
SNX9Q9Y5X1 AC231759.1-201ENST00000616455 597 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms