Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.4
PCDHGA11Q9Y5H2 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
PCDHGA11Q9Y5H2 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AC105235.1-201ENST00000623208 1816 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AL359643.1-201ENST00000404109 423 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AL589794.1-201ENST00000424971 390 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 RPL7L1P10-201ENST00000427790 463 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AL118520.1-201ENST00000450770 291 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 ELOCP24-201ENST00000456370 334 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 RPL30P15-201ENST00000457129 321 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AKR1D1P1-201ENST00000457236 936 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 RNU7-59P-201ENST00000459101 61 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 RN7SL70P-201ENST00000478322 302 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AC020893.1-201ENST00000502452 580 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 RNU6-1038P-201ENST00000516516 104 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 IMMP1LP2-201ENST00000552954 492 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AL358913.1-201ENST00000554342 121 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AL513327.3-201ENST00000602618 469 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 SNORD96A-201ENST00000606577 79 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AL390240.1-201ENST00000612950 384 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 RFPL4AP6-201ENST00000616792 846 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 MRPL57P1-201ENST00000621486 265 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AC007792.1-201ENST00000623023 402 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 SMG1P7-201ENST00000565246 2704 ntBASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA11Q9Y5H2 AC110373.1-201ENST00000505994 3505 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC235565.1-201ENST00000456962 1325 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 RNU6-82P-201ENST00000363970 107 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 SNORD82-201ENST00000365530 70 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 Y_RNA.378-201ENST00000365652 113 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AL353133.1-201ENST00000407695 401 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 MIR1302-3-201ENST00000408128 138 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 RNA5SP115-201ENST00000411160 107 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AL031681.1-201ENST00000443304 400 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 RPL21P133-201ENST00000443666 476 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms