Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PKP3Q9Y446 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PKP3Q9Y446 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PKP3Q9Y446 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 MTND5P31-201ENST00000419366 1374 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 AL118496.1-201ENST00000440201 1812 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC090017.1-201ENST00000548612 1779 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC103591.2-201ENST00000265259 766 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC021146.4-201ENST00000309229 279 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 SNORD113.2-201ENST00000364166 89 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PKP3Q9Y446 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 PRRC2CP1-201ENST00000404428 159 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 RPS16P5-201ENST00000406501 404 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 VDAC1P9-201ENST00000412766 841 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 AL136133.1-201ENST00000413694 376 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 AL445567.1-201ENST00000439121 144 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 CEACAMP6-201ENST00000452007 574 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 AL513533.1-201ENST00000453728 415 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 RPS15AP1-201ENST00000457423 391 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 RN7SL354P-201ENST00000469282 294 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 RPS3AP43-201ENST00000479743 781 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC108022.1-201ENST00000493466 478 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 MTCO3P28-201ENST00000513351 515 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 RNU6-488P-201ENST00000515918 99 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 RN7SKP96-201ENST00000516948 297 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 AP006289.1-201ENST00000538089 277 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC063949.1-201ENST00000552900 865 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 MIR4999-201ENST00000585029 91 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC100847.1-201ENST00000611316 481 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC243756.2-201ENST00000618406 463 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PKP3Q9Y446 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PKP3Q9Y446 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PKP3Q9Y446 AC104118.1-201ENST00000607625 1589 ntBASIC4.56□□□□□ -1.68
PKP3Q9Y446 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PKP3Q9Y446 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PKP3Q9Y446 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PKP3Q9Y446 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.55□□□□□ -1.68
PKP3Q9Y446 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PKP3Q9Y446 AC107982.1-201ENST00000507171 1300 ntBASIC4.55□□□□□ -1.68
PKP3Q9Y446 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.55□□□□□ -1.68
PKP3Q9Y446 AC009229.4-201ENST00000623854 1947 ntBASIC4.55□□□□□ -1.68
PKP3Q9Y446 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.55□□□□□ -1.68
PKP3Q9Y446 OR4K15-201ENST00000305051 1216 ntBASIC4.55□□□□□ -1.68
PKP3Q9Y446 RNU6-931P-201ENST00000363850 107 ntBASIC4.55□□□□□ -1.68
PKP3Q9Y446 SNORA70F-201ENST00000384142 135 ntBASIC4.55□□□□□ -1.68
PKP3Q9Y446 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PKP3Q9Y446 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PKP3Q9Y446 RNU6-603P-201ENST00000411403 107 ntBASIC4.55□□□□□ -1.68
PKP3Q9Y446 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.55□□□□□ -1.68
PKP3Q9Y446 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.55□□□□□ -1.68
PKP3Q9Y446 AC233981.1-201ENST00000423224 461 ntBASIC4.55□□□□□ -1.68
PKP3Q9Y446 RPS26P47-201ENST00000427219 348 ntBASIC4.55□□□□□ -1.68
PKP3Q9Y446 AL390023.1-201ENST00000428836 262 ntBASIC4.55□□□□□ -1.68
PKP3Q9Y446 RPL21P91-201ENST00000429231 479 ntBASIC4.55□□□□□ -1.68
PKP3Q9Y446 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.55□□□□□ -1.68
PKP3Q9Y446 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.55□□□□□ -1.68
PKP3Q9Y446 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.55□□□□□ -1.68
PKP3Q9Y446 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
PKP3Q9Y446 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.55□□□□□ -1.68
PKP3Q9Y446 RPL23AP93-201ENST00000440847 484 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms