Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 AC090877.1-201ENST00000561418 344 ntBASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 MTCYBP28-201ENST00000566728 1132 ntBASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 AC112230.1-201ENST00000604342 547 ntBASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 HMGN2P28-201ENST00000606102 262 ntBASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 U73479.1-201ENST00000618062 168 ntBASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 U7.8-201ENST00000619968 63 ntBASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 AL139089.1-201ENST00000620372 975 ntBASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 AP003400.6-201ENST00000624698 740 ntBASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 MTND4P8-201ENST00000514997 1362 ntBASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.21□□□□□ -1.9
RCL1Q9Y2P8 AL132640.2-201ENST00000559968 1698 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 USP8P1-201ENST00000494673 3183 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC016716.1-201ENST00000265882 708 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 OR4K15-201ENST00000305051 1216 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 MIR585-201ENST00000384887 94 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 HMGB3P19-201ENST00000403971 560 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 SNORA11B-201ENST00000408175 129 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC002075.2-201ENST00000425207 252 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 MORF4L1P7-201ENST00000426038 703 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC068287.1-201ENST00000430283 295 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 PTP4A1P3-201ENST00000433661 420 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 CYCSP43-201ENST00000438233 310 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 SBDSP1-204ENST00000453858 737 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 SNRPGP3-201ENST00000469405 227 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC104108.1-201ENST00000509930 412 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC008958.1-201ENST00000511047 682 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 TVP23BP1-201ENST00000557500 617 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 MIR4504-201ENST00000577413 92 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 MIR4644-201ENST00000579929 84 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC017100.2-201ENST00000584628 355 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AC040174.2-201ENST00000602701 465 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 ELL2P4-201ENST00000446870 1376 ntBASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RCL1Q9Y2P8 AF127577.6-201ENST00000623352 2191 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 FAM91A3P-201ENST00000456826 2544 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 SNORA60-201ENST00000362396 134 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 SNORA11C-201ENST00000408532 129 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 RPS27AP12-201ENST00000429552 465 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 HIGD1AP4-201ENST00000430194 280 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 RANP8-201ENST00000444720 713 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AC239367.2-201ENST00000447309 705 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AC098824.1-201ENST00000453565 980 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 AC007688.1-201ENST00000475592 759 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 RN7SL481P-201ENST00000477764 299 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 RN7SL810P-201ENST00000493031 276 ntBASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.19□□□□□ -1.9
RCL1Q9Y2P8 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms