Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS4AQ9UN37 MIR3915-201ENST00000578518 97 ntBASIC4.71□□□□□ -1.66
VPS4AQ9UN37 AC091042.1-201ENST00000579213 173 ntBASIC4.71□□□□□ -1.66
VPS4AQ9UN37 MIR3667-201ENST00000581025 74 ntBASIC4.71□□□□□ -1.66
VPS4AQ9UN37 MIR4691-201ENST00000583764 85 ntBASIC4.71□□□□□ -1.66
VPS4AQ9UN37 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS4AQ9UN37 RPL26P30-202ENST00000602923 645 ntBASIC4.71□□□□□ -1.66
VPS4AQ9UN37 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4AQ9UN37 AC005332.6-201ENST00000613178 446 ntBASIC4.71□□□□□ -1.66
VPS4AQ9UN37 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS4AQ9UN37 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4AQ9UN37 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4AQ9UN37 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4AQ9UN37 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS4AQ9UN37 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VPS4AQ9UN37 AC092162.3-201ENST00000624511 1624 ntBASIC4.71□□□□□ -1.66
VPS4AQ9UN37 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
VPS4AQ9UN37 AL353743.4-201ENST00000422653 1547 ntBASIC4.71□□□□□ -1.66
VPS4AQ9UN37 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VPS4AQ9UN37 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AL592182.3-201ENST00000642132 3304 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 SNORD116-4-201ENST00000384733 96 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AL049693.1-201ENST00000402760 611 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AL031577.2-201ENST00000404133 280 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AL021407.1-201ENST00000404531 386 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AL133264.1-201ENST00000407157 562 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 RN7SKP27-201ENST00000410684 333 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 RNU2-42P-201ENST00000410697 113 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC234782.4-201ENST00000417646 1048 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 BOLA3P4-201ENST00000418151 400 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC009237.2-201ENST00000421358 284 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AL022400.1-201ENST00000423946 935 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AL591503.2-201ENST00000442314 1005 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 RPL12P26-201ENST00000452430 487 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 snoU13.1-201ENST00000459157 104 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 RPS17P2-201ENST00000461663 408 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC090686.1-201ENST00000481577 749 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 RPL7P38-201ENST00000488396 739 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AF186190.1-201ENST00000517470 480 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 IGKV1-32-201ENST00000519290 311 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC136624.4-201ENST00000573044 370 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC091488.1-201ENST00000604239 660 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AL049794.2-201ENST00000616301 365 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC073530.2-201ENST00000623987 261 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 CR392039.4-201ENST00000624968 501 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC026634.1-201ENST00000634369 198 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 AP000756.2-201ENST00000624168 2567 ntBASIC4.7□□□□□ -1.66
VPS4AQ9UN37 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
VPS4AQ9UN37 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC139713.2-215ENST00000641428 5037 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 OR52B1P-201ENST00000316506 909 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 RPS3AP26-201ENST00000398259 784 ntBASIC4.69□□□□□ -1.66
VPS4AQ9UN37 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4AQ9UN37 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 340.9 ms