Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AL049634.3-201ENST00000604968 457 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AL391497.1-201ENST00000608671 547 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AL591424.2-201ENST00000617023 128 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AC004943.3-201ENST00000624116 600 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AL773545.4-201ENST00000637262 310 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AL513478.4-201ENST00000641636 310 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 RNU6-532P-201ENST00000384318 107 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 RNA5SP104-201ENST00000410989 118 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AC010385.1-201ENST00000412374 256 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AC004552.1-201ENST00000419089 348 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 RPS12P23-201ENST00000419579 400 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 RPL37P1-201ENST00000432310 284 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 MTCYBP12-201ENST00000440559 1134 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AC023512.1-201ENST00000444513 499 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 RPL23AP23-201ENST00000452590 471 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 NANOGP10-201ENST00000453325 895 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AC078857.1-201ENST00000469870 667 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 RPS26P3-201ENST00000470205 348 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AC090543.2-201ENST00000483963 348 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AC004057.1-201ENST00000485827 348 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AC112206.4-201ENST00000515142 405 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 IGKV2D-23-201ENST00000518179 286 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AC022790.1-201ENST00000522872 204 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AC092451.2-201ENST00000538746 658 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AC015911.5-201ENST00000587076 451 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AL133445.2-201ENST00000611191 527 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 AL138960.2-201ENST00000625145 535 ntBASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
APOBEC3BQ9UH17 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 ZNF285B-201ENST00000561698 1767 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 AC066616.2-201ENST00000559334 1481 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 RAD1P1-201ENST00000231383 813 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 SNORA71.3-201ENST00000362582 128 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 U1.1-201ENST00000384101 164 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 U8.11-201ENST00000384699 133 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 U8.12-201ENST00000384701 133 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 ATP5F1P6-201ENST00000402768 767 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 AMD1P2-201ENST00000412936 992 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 PTP4A1P5-201ENST00000420305 455 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 MTCO2P1-201ENST00000424648 477 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 AL591419.1-201ENST00000427423 339 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 AL050321.1-201ENST00000432363 400 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 ELOCP18-201ENST00000434209 337 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 AL512661.1-201ENST00000434586 1253 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 AC083863.1-201ENST00000438811 231 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 ELOCP8-201ENST00000439309 332 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 ELOCP15-201ENST00000442090 332 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 RNFT1P2-201ENST00000443064 757 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 ANP32BP2-201ENST00000454525 545 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 MTND2P39-201ENST00000457230 764 ntBASIC3.81□□□□□ -1.8
APOBEC3BQ9UH17 U8.18-201ENST00000459285 133 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms