Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.97□□□□□ -1.61
DKK3Q9UBP4 ZNF415P1-201ENST00000582279 1166 ntBASIC4.97□□□□□ -1.61
DKK3Q9UBP4 MIR4737-201ENST00000583979 81 ntBASIC4.97□□□□□ -1.61
DKK3Q9UBP4 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.97□□□□□ -1.61
DKK3Q9UBP4 RSL24D1P11-201ENST00000591045 491 ntBASIC4.97□□□□□ -1.61
DKK3Q9UBP4 AC073544.2-201ENST00000601155 540 ntBASIC4.97□□□□□ -1.61
DKK3Q9UBP4 WISP1-OT1-201ENST00000602893 642 ntBASIC4.97□□□□□ -1.61
DKK3Q9UBP4 AC104687.2-201ENST00000604442 342 ntBASIC4.97□□□□□ -1.61
DKK3Q9UBP4 AC018714.1-201ENST00000605028 208 ntBASIC4.97□□□□□ -1.61
DKK3Q9UBP4 AL353726.1-201ENST00000614041 1000 ntBASIC4.97□□□□□ -1.61
DKK3Q9UBP4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.97□□□□□ -1.61
DKK3Q9UBP4 AC091953.3-201ENST00000623220 236 ntBASIC4.97□□□□□ -1.61
DKK3Q9UBP4 MIR7641-1-201ENST00000627518 61 ntBASIC4.97□□□□□ -1.61
DKK3Q9UBP4 AC090582.1-201ENST00000636321 199 ntBASIC4.97□□□□□ -1.61
DKK3Q9UBP4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
DKK3Q9UBP4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.97□□□□□ -1.61
DKK3Q9UBP4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
DKK3Q9UBP4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
DKK3Q9UBP4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
DKK3Q9UBP4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.97□□□□□ -1.61
DKK3Q9UBP4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.97□□□□□ -1.61
DKK3Q9UBP4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
DKK3Q9UBP4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
DKK3Q9UBP4 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.97□□□□□ -1.61
DKK3Q9UBP4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
DKK3Q9UBP4 AC010329.2-201ENST00000595195 2737 ntBASIC4.96□□□□□ -1.61
DKK3Q9UBP4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
DKK3Q9UBP4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC063976.2-201ENST00000425667 3556 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 Y_RNA.553-201ENST00000384670 102 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 MIR92A2-201ENST00000385299 75 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 MT-TH-201ENST00000387441 69 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 RN7SKP16-201ENST00000410180 299 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AL049610.1-201ENST00000423374 372 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 OR5BE1P-201ENST00000425977 939 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC245028.2-201ENST00000458673 253 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 RPL7AP28-201ENST00000464513 571 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC073073.1-201ENST00000493920 463 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 NIFKP7-201ENST00000503365 834 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 DYNLL1P6-201ENST00000503440 264 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 LTV1P1-201ENST00000510683 1237 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 BNIP3P1-201ENST00000547295 580 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC137768.1-201ENST00000549998 553 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC074051.3-201ENST00000570238 358 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 BPTFP1-201ENST00000579209 492 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC103881.1-201ENST00000603476 538 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC020910.3-201ENST00000603701 874 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC131235.4-201ENST00000609288 620 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC009237.17-201ENST00000618111 748 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC019206.1-201ENST00000621938 425 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AC116618.1-201ENST00000634617 774 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 OR5BE1P-202ENST00000641168 1176 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.96□□□□□ -1.62
DKK3Q9UBP4 SDAD1P1-202ENST00000524156 2051 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AL133243.3-201ENST00000617415 3004 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 AL672167.1-204ENST00000641875 3017 ntBASIC4.96□□□□□ -1.62
DKK3Q9UBP4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 MTND4P34-201ENST00000572715 1371 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 RNU6-500P-201ENST00000362349 107 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 RNU1-94P-201ENST00000362627 173 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 RNU6-619P-201ENST00000365146 108 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 SNORA62-201ENST00000365493 153 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 MIR192-201ENST00000384915 110 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 SNORA26.8-201ENST00000391306 124 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms