Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 RPL7AP52-201ENST00000458096 790 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 RN7SL329P-201ENST00000467740 299 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 RPS3AP6-201ENST00000484430 795 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC020699.1-201ENST00000505161 445 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 RNU6-1028P-201ENST00000517164 93 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC026407.1-201ENST00000518369 204 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 IGKV2D-10-201ENST00000520194 281 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 OR8I1P-201ENST00000529291 931 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC091515.1-201ENST00000548110 679 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 PCNPP1-201ENST00000552501 511 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC069366.1-201ENST00000583159 838 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 ZNF92P3-201ENST00000596594 954 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AL450336.1-201ENST00000605180 586 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC106052.1-201ENST00000608029 497 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 PART1_2.1-201ENST00000612397 250 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC140725.3-201ENST00000616193 880 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC090246.1-201ENST00000616499 426 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AL713922.2-201ENST00000619384 716 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AL136964.1-201ENST00000622038 2990 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.9□□□□□ -1.78
NDE1Q9NXR1 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.78
NDE1Q9NXR1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.9□□□□□ -1.78
NDE1Q9NXR1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 ENSAP3-201ENST00000312710 333 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 RPL23AP59-201ENST00000399415 461 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 MIR1303-201ENST00000408625 86 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AL592310.1-201ENST00000414330 671 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 BTF3P8-201ENST00000414577 526 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC092648.1-201ENST00000425870 423 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 HMGB3P5-201ENST00000428894 612 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 RPL12P3-201ENST00000440080 396 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AL358794.1-201ENST00000445689 381 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC244505.3-201ENST00000454598 187 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 RNU7-140P-201ENST00000459546 60 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 NIPA2P2-201ENST00000496376 1083 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC068305.1-201ENST00000497406 726 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 RN7SKP265-201ENST00000516448 223 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 RNA5SP309-201ENST00000516670 106 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 Y_RNA.717-201ENST00000517106 92 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC083923.1-201ENST00000523708 376 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC023824.3-201ENST00000569003 562 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 MIR4716-201ENST00000579628 84 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 VN1R84P-201ENST00000593697 235 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 BNIP3P38-201ENST00000601117 544 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC008782.1-201ENST00000603386 430 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC115286.1-201ENST00000604298 434 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC024940.4-201ENST00000605507 246 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 uc_338.9-201ENST00000617424 182 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AC006963.1-201ENST00000624003 1052 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 AL121594.5-201ENST00000631724 573 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 EXOC5P1-201ENST00000510543 1969 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.9□□□□□ -1.79
NDE1Q9NXR1 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms