Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL365396.1-201ENST00000430854 671 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 MTCYBP12-201ENST00000440559 1134 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 AL627224.1-201ENST00000448334 444 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 AC010655.1-201ENST00000449336 292 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 RN7SL132P-201ENST00000478131 296 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 RPL21P103-201ENST00000479921 488 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 UBE2CP3-201ENST00000502715 450 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 ACTR6P1-201ENST00000514311 1104 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 SNORA26.10-201ENST00000516427 141 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 RANP9-201ENST00000519957 271 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 AC008083.2-201ENST00000546707 476 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 MIR4697-201ENST00000582977 78 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 AC107982.3-201ENST00000584957 985 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 AL451086.1-201ENST00000605596 223 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 AC016717.3-201ENST00000624730 554 ntBASIC3.62□□□□□ -1.83
TREX1Q9NSU2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
TREX1Q9NSU2 AL359715.4-201ENST00000606629 1436 ntBASIC3.61□□□□□ -1.83
TREX1Q9NSU2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 RN7SKP227-201ENST00000364445 330 ntBASIC3.61□□□□□ -1.83
TREX1Q9NSU2 MIR421-201ENST00000365696 85 ntBASIC3.61□□□□□ -1.83
TREX1Q9NSU2 U3.39-201ENST00000408569 239 ntBASIC3.61□□□□□ -1.83
TREX1Q9NSU2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 XKRYP6-201ENST00000440468 1116 ntBASIC3.61□□□□□ -1.83
TREX1Q9NSU2 XKRYP3-201ENST00000442113 1116 ntBASIC3.61□□□□□ -1.83
TREX1Q9NSU2 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 NIPA2P2-201ENST00000496376 1083 ntBASIC3.61□□□□□ -1.83
TREX1Q9NSU2 RPL7P47-201ENST00000497299 556 ntBASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 OR4U1P-201ENST00000554958 912 ntBASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AC106785.3-201ENST00000564064 847 ntBASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AC006077.1-201ENST00000604746 343 ntBASIC3.61□□□□□ -1.83
TREX1Q9NSU2 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.61□□□□□ -1.83
TREX1Q9NSU2 AC015813.6-201ENST00000624409 5808 ntBASIC3.61□□□□□ -1.83
TREX1Q9NSU2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 RNA5SP51-201ENST00000364750 119 ntBASIC3.6□□□□□ -1.83
TREX1Q9NSU2 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 SNORA57.3-201ENST00000411095 141 ntBASIC3.6□□□□□ -1.83
TREX1Q9NSU2 RPL30P2-201ENST00000414021 291 ntBASIC3.6□□□□□ -1.83
TREX1Q9NSU2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 AC009263.1-201ENST00000441193 1239 ntBASIC3.6□□□□□ -1.83
TREX1Q9NSU2 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 AL157827.1-201ENST00000447622 132 ntBASIC3.6□□□□□ -1.83
TREX1Q9NSU2 MORF4L1P4-201ENST00000450245 976 ntBASIC3.6□□□□□ -1.83
TREX1Q9NSU2 PPIAP3-201ENST00000450588 505 ntBASIC3.6□□□□□ -1.83
TREX1Q9NSU2 CFTRP1-201ENST00000456646 183 ntBASIC3.6□□□□□ -1.83
TREX1Q9NSU2 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.6□□□□□ -1.83
TREX1Q9NSU2 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 IGKV2-23-201ENST00000518729 323 ntBASIC3.6□□□□□ -1.83
TREX1Q9NSU2 AP000926.4-201ENST00000527351 454 ntBASIC3.6□□□□□ -1.83
TREX1Q9NSU2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 AP004242.1-201ENST00000533701 349 ntBASIC3.6□□□□□ -1.83
TREX1Q9NSU2 AC006270.2-201ENST00000578523 652 ntBASIC3.6□□□□□ -1.83
TREX1Q9NSU2 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 VN1R85P-201ENST00000601587 426 ntBASIC3.6□□□□□ -1.83
TREX1Q9NSU2 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.6□□□□□ -1.83
TREX1Q9NSU2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms