Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC093019.1-201ENST00000443135 252 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 GAPDHP14-201ENST00000450472 937 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 RPS20P24-201ENST00000457473 361 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 PMCHL2-203ENST00000457791 237 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 HMGN1P10-201ENST00000474557 553 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC008638.1-201ENST00000506035 866 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC006499.2-201ENST00000513470 337 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 Y_RNA.693-201ENST00000516641 110 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 RPL21P5-201ENST00000554662 472 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AL390334.1-201ENST00000556395 450 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC025678.1-201ENST00000567861 338 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC022884.3-201ENST00000579571 248 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 MIR4505-201ENST00000582238 73 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 FO393422.1-201ENST00000603908 708 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC019193.2-201ENST00000610012 634 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 SDR42E1P1-201ENST00000611327 477 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AL691477.1-201ENST00000624398 162 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC006065.6-201ENST00000625201 545 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 LINC01963-201ENST00000562038 3148 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC011755.1-201ENST00000623763 2049 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC068870.1-201ENST00000563737 2455 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 SAMMSON-213ENST00000641336 1521 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC138915.3-201ENST00000562908 1389 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC119744.1-201ENST00000454746 1715 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 SNRPEP3-201ENST00000338402 276 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 RN7SKP160-201ENST00000363804 340 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 Y_RNA.279-201ENST00000364763 95 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 RNU6-809P-201ENST00000384461 107 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 RPS6P23-201ENST00000413224 722 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 BX295541.1-201ENST00000417774 250 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC234781.4-201ENST00000419384 244 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC007161.1-204ENST00000423039 460 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC090804.1-201ENST00000448870 490 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 FABP3P2-201ENST00000453169 399 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC097493.1-201ENST00000463958 372 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC009120.1-201ENST00000493458 473 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 RN7SL466P-201ENST00000497546 295 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 KLRA1P-201ENST00000503499 986 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 ENPP7P11-201ENST00000505915 627 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AP003467.2-201ENST00000520175 319 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 ARL2BPP5-201ENST00000523141 481 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 CBX3P5-201ENST00000552017 521 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 MIR3682-201ENST00000581338 84 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC073091.2-201ENST00000603205 907 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 BNIP3P11-201ENST00000603878 563 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC097468.3-201ENST00000607956 456 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC009159.1-201ENST00000618386 642 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC074140.1-201ENST00000621617 208 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 AC021106.3-201ENST00000623925 531 ntBASIC5.69□□□□□ -1.5
FOXP3Q9BZS1 PISRT1-201ENST00000626175 531 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms