Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC068790.5-201ENST00000602741 355 ntBASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 RN7SL787P-201ENST00000613000 284 ntBASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 AL133173.2-201ENST00000614270 90 ntBASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 CR392039.4-201ENST00000624968 501 ntBASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 SNORA17.5-201ENST00000630429 132 ntBASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 OR13C1P-202ENST00000641378 2919 ntBASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 AC024560.2-201ENST00000507981 1497 ntBASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 AC125336.1-201ENST00000508893 2827 ntBASIC5.38□□□□□ -1.55
PTCHD1Q96NR3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 ERCC6-202ENST00000374127 1782 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 Y_RNA.159-201ENST00000363674 87 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 RNU6-1322P-201ENST00000364309 107 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 MRPL42P2-201ENST00000403169 426 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 EEF1A1P40-201ENST00000412883 573 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 SUMO2P3-201ENST00000438311 288 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 RPL7AP10-201ENST00000481016 791 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 RPL36AP51-201ENST00000487216 318 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 DUTP1-201ENST00000493631 470 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 RPSAP51-201ENST00000497462 645 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC022616.6-201ENST00000520479 119 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC125611.2-201ENST00000551907 647 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 SUB1P2-201ENST00000556401 297 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 RPS3AP23-202ENST00000574601 686 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 BBIP1P1-201ENST00000602999 279 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC055876.5-201ENST00000605667 259 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 COX6CP4-201ENST00000605798 228 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC006504.8-201ENST00000621046 635 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 FRG1KP-201ENST00000623592 341 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC010149.2-201ENST00000637608 315 ntBASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
PTCHD1Q96NR3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 RNA5SP46-201ENST00000362370 120 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 RNY3P3-201ENST00000363816 102 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 RN7SKP81-201ENST00000365603 331 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 RPL11P3-201ENST00000395256 523 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 RPL23AP32-201ENST00000395315 459 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms