Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC092435.4-201ENST00000623012 4159 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AC068254.2-201ENST00000623938 3577 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AC126755.2-208ENST00000327792 462 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AC138969.1-213ENST00000331436 462 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 IL6STP1-201ENST00000346911 1020 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 RNA5SP391-201ENST00000363456 119 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 Y_RNA.311-201ENST00000365068 96 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AL590762.2-201ENST00000395798 571 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 CYCSP10-201ENST00000417973 294 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 CENPIP1-201ENST00000425713 902 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 RPP40P1-201ENST00000426762 456 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 IFNNP1-201ENST00000429219 553 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AL354941.1-201ENST00000438600 464 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 MTND2P22-201ENST00000444325 1033 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 ARL2BPP10-201ENST00000446487 531 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AC079168.2-201ENST00000453977 416 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AC010326.1-201ENST00000462726 602 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 RNU6-1129P-201ENST00000515964 104 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 ELOCP32-201ENST00000548625 324 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AL360219.1-201ENST00000610230 366 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHMP4CQ96CF2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC079741.1-201ENST00000321498 212 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 DSTNP4-201ENST00000399472 474 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 MIR298-201ENST00000401212 88 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC119751.6-201ENST00000416712 186 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC092634.6-201ENST00000418558 192 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 PTP4A1P5-201ENST00000420305 455 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AL158073.1-201ENST00000426848 1104 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 SETP8-201ENST00000435341 628 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 YWHAZP8-201ENST00000436935 731 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC241584.1-201ENST00000438469 1241 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 Z83846.1-201ENST00000446798 265 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 H2AFZP5-201ENST00000446960 382 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 RPL12P26-201ENST00000452430 487 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AL109741.2-201ENST00000455561 343 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC011005.3-201ENST00000491624 395 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC104090.1-201ENST00000506341 1171 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC021146.8-201ENST00000507455 733 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC111000.3-201ENST00000508057 576 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 SNORA48.10-201ENST00000516965 160 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC105185.1-201ENST00000518705 535 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 AC090515.3-201ENST00000560431 315 ntBASIC5.56□□□□□ -1.52
CHMP4CQ96CF2 EIF5A2P1-201ENST00000564027 460 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms