Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AC091515.1-201ENST00000548110 679 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 ARF4P1-201ENST00000605447 541 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AC091946.2-201ENST00000606105 291 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AC012409.3-201ENST00000611343 981 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 AC007529.1-201ENST00000418574 2178 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 CYP1D1P-201ENST00000416662 1433 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HMGB4Q8WW32 CDR1-202ENST00000625883 1485 ntBASIC4.69□□□□□ -1.66
HMGB4Q8WW32 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 RNU6-931P-201ENST00000363850 107 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 OR6C69P-201ENST00000394268 893 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC004022.2-201ENST00000413824 193 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 RPL21P108-201ENST00000413857 481 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC098592.1-201ENST00000419352 333 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AL354941.1-201ENST00000438600 464 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AL606662.1-201ENST00000445763 553 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AL589765.3-201ENST00000446084 462 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 CYCSP34-201ENST00000458172 304 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 BET1P1-201ENST00000482276 359 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 SETP14-201ENST00000497538 873 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC006349.1-201ENST00000555526 235 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC074050.1-201ENST00000563247 211 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC109446.2-201ENST00000567872 497 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC074051.3-201ENST00000570238 358 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 MIR4472-2-201ENST00000582069 67 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 MIR4999-201ENST00000585029 91 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC103881.1-201ENST00000603476 538 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC106791.2-201ENST00000604680 391 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC090948.1-201ENST00000607464 549 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC091979.2-201ENST00000607514 214 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AL603755.1-201ENST00000619504 163 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC098679.5-201ENST00000624394 571 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC120349.2-201ENST00000625002 298 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 AC104623.2-202ENST00000623477 4002 ntBASIC4.68□□□□□ -1.66
HMGB4Q8WW32 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGB4Q8WW32 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms