Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC168Q8NDH2 CR383658.2-201ENST00000547576 1525 ntBASIC2.82□□□□□ -1.96
CCDC168Q8NDH2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CCDC168Q8NDH2 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 AC112492.1-201ENST00000449607 712 ntBASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 HMGB3P13-201ENST00000511263 607 ntBASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 AC023161.2-201ENST00000551218 780 ntBASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 DCAF13P3-201ENST00000561147 1334 ntBASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 U3.23-201ENST00000391132 200 ntBASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 RPS20P22-201ENST00000473700 357 ntBASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 PSMA2P1-201ENST00000526365 646 ntBASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 AC027281.1-201ENST00000574178 758 ntBASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 AC068020.1-201ENST00000594215 661 ntBASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 AL360085.1-201ENST00000604713 532 ntBASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 ATP1B3P1-201ENST00000605365 821 ntBASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 AL592295.2-201ENST00000612578 206 ntBASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC168Q8NDH2 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 Y_RNA.796-201ENST00000364268 102 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 Y_RNA.799-201ENST00000364992 102 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 MIR489-201ENST00000384923 84 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 Z99755.1-201ENST00000414048 380 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 RPS29P31-201ENST00000446147 164 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 NECAP1P2-201ENST00000455668 727 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 RN7SKP46-201ENST00000515942 234 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AC009812.2-201ENST00000517657 457 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AC019227.1-201ENST00000526902 510 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AC023389.2-201ENST00000580031 955 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 MIR2682-201ENST00000580305 110 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AP000255.1-201ENST00000610276 676 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AC015871.5-202ENST00000623252 701 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 Y_RNA.508-201ENST00000384502 114 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 SEPT7P8-201ENST00000413308 775 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AC022018.1-201ENST00000430685 241 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 TRIM60P18-201ENST00000441518 828 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 TRBV12-2-201ENST00000489763 344 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 RPL7P47-201ENST00000497299 556 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 TRAV15-201ENST00000556680 249 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AC009852.2-201ENST00000567898 485 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 AL645568.2-201ENST00000432815 1337 ntBASIC2.8□□□□□ -1.96
CCDC168Q8NDH2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 DBIP2-201ENST00000419076 262 ntBASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 AL357552.1-201ENST00000445254 415 ntBASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 AC023598.1-201ENST00000472521 361 ntBASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 AC055855.1-201ENST00000489563 579 ntBASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 AC138832.1-201ENST00000522871 556 ntBASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 AC008489.1-201ENST00000524271 483 ntBASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 AL139174.1-201ENST00000531489 886 ntBASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 AC027287.1-201ENST00000553115 1453 ntBASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 MTCO1P9-201ENST00000505577 1534 ntBASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 HSPA8P4-201ENST00000511877 1920 ntBASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CCDC168Q8NDH2 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms