Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 AL445584.1-201ENST00000431451 330 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 MTND4P15-201ENST00000437913 1033 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC009263.1-201ENST00000441193 1239 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 ABCF2P2-201ENST00000450549 296 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AL353718.1-201ENST00000451028 517 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 FGF7P3-201ENST00000454645 303 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 RPS20P32-201ENST00000456044 356 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 UBTFL6-201ENST00000477929 1024 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC110792.1-201ENST00000491826 472 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC025768.1-201ENST00000510057 267 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 PAICSP4-201ENST00000517543 1253 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC104115.2-201ENST00000523026 687 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 PHBP17-201ENST00000528576 541 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AP003717.3-201ENST00000544832 1180 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC104229.1-201ENST00000561364 255 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC017100.2-201ENST00000584628 355 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC107982.3-201ENST00000584957 985 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC112503.2-201ENST00000609005 552 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC096586.1-201ENST00000610267 561 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC084757.4-201ENST00000616350 526 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC009237.17-201ENST00000618111 748 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC039056.2-201ENST00000622261 511 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AP006248.3-201ENST00000623580 594 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC055839.1-201ENST00000634467 498 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 AC132825.7-201ENST00000638744 335 ntBASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
HDDC3Q8N4P3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 MTND5P3-201ENST00000438536 1800 ntBASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AL121834.1-202ENST00000404494 277 ntBASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 RNU6-272P-201ENST00000411028 104 ntBASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AC008173.1-201ENST00000418901 264 ntBASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AC241520.1-201ENST00000422654 1099 ntBASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 RPL38P1-201ENST00000460914 211 ntBASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 COL6A4P2-205ENST00000509855 506 ntBASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 OR6C73P-201ENST00000546432 358 ntBASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AC069200.1-201ENST00000609511 323 ntBASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AC245100.7-201ENST00000609678 442 ntBASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AL109659.3-201ENST00000624985 950 ntBASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AC138649.5-201ENST00000637456 137 ntBASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AC116667.1-201ENST00000604855 2072 ntBASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
HDDC3Q8N4P3 AL161912.2-201ENST00000565707 3007 ntBASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 AC018529.3-201ENST00000624212 2254 ntBASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 MIR16-2-201ENST00000362117 81 ntBASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 FABP5P3-201ENST00000437960 408 ntBASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 AC092170.1-201ENST00000440211 356 ntBASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 RPL23AP33-201ENST00000442301 452 ntBASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 RPL6P5-201ENST00000445678 828 ntBASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 AP000873.1-201ENST00000463987 400 ntBASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.16□□□□□ -1.74
HDDC3Q8N4P3 RN7SKP157-201ENST00000516174 282 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms