Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC140479.3-201ENST00000418944 1126 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AL009174.1-201ENST00000426577 416 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 MTCO1P54-201ENST00000430139 712 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AL353748.1-201ENST00000440753 474 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AL591503.2-201ENST00000442314 1005 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC243772.1-201ENST00000451620 410 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AL121877.1-201ENST00000453704 622 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 BX248409.1-201ENST00000455497 255 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 RPL23AP12-201ENST00000467573 473 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 MTND4P2-201ENST00000507767 1203 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 RNU2-30P-201ENST00000516209 141 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC105185.1-201ENST00000518705 535 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC090281.1-201ENST00000523019 276 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC069240.1-201ENST00000548774 375 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 ISCA1P3-201ENST00000577104 373 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 VN1R90P-201ENST00000595717 726 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AL031320.1-201ENST00000604177 357 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC018445.2-201ENST00000622987 260 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 FP325313.1-201ENST00000638228 703 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 CASC19-222ENST00000641321 1173 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC135352.1-201ENST00000506173 1418 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC087359.1-201ENST00000508335 1740 ntBASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.26□□□□□ -1.73
CLIP4Q8N3C7 DCAF13P3-201ENST00000561147 1334 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 SNORD65.1-201ENST00000390889 71 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 MRPS36P1-201ENST00000421291 307 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 DPRXP1-201ENST00000426312 460 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 DLGAP5P1-201ENST00000430307 464 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 SEPT7P5-201ENST00000434048 306 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC005154.2-201ENST00000438110 379 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 PTMAP6-201ENST00000439110 327 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 CBX1P4-201ENST00000439415 457 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AL360221.1-201ENST00000445989 335 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AL451050.1-201ENST00000450126 415 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 MTCO3P16-201ENST00000454456 754 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 MTCO2P18-201ENST00000457151 658 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 RPL36AP41-201ENST00000493820 306 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AL035404.1-201ENST00000497982 568 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC098799.3-201ENST00000506095 438 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC079395.1-201ENST00000510981 262 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC010587.2-201ENST00000511727 448 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 RPL12P22-201ENST00000519073 490 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms