Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 MTCO1P7-201ENST00000419523 1542 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 IMMTP1-201ENST00000435590 2219 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 Y_RNA.222-201ENST00000364264 102 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 Y_RNA.485-201ENST00000384395 102 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 NDUFS5P1-201ENST00000405668 289 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 AL139396.1-201ENST00000421137 167 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 RPL23AP4-201ENST00000427757 463 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 RPL7L1P10-201ENST00000427790 463 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 AL451136.1-201ENST00000435399 325 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 ATP5LP2-201ENST00000440646 311 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 CRYGGP-201ENST00000443337 145 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 AL161636.2-201ENST00000445179 927 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 FTH1P25-201ENST00000447665 469 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 AC116655.1-201ENST00000508324 901 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 PRMT5P1-201ENST00000514351 598 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 RNU6-699P-201ENST00000517081 110 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 RNA5SP340-201ENST00000517132 107 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 RNA5SP454-201ENST00000517231 127 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 IGHV3-76-201ENST00000522465 295 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 OR5M2P-201ENST00000529003 936 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 GNAI2P1-201ENST00000541815 315 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 AC092375.1-201ENST00000550410 637 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 MIR548Y-201ENST00000582739 110 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 BX664608.1-201ENST00000610519 487 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 AL049555.1-201ENST00000562834 1933 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 PARP4P1-201ENST00000435945 2337 ntBASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AC130360.2-201ENST00000533477 1556 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 LINC00561-201ENST00000565815 2738 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 Y_RNA.29-201ENST00000362570 113 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 RNU2-36P-201ENST00000410361 191 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AC114814.2-201ENST00000419195 485 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 RPS15AP10-201ENST00000432472 382 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AL138799.3-201ENST00000438968 350 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 MORF4-201ENST00000447135 971 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 PPIAP7-201ENST00000454070 489 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AC126389.1-201ENST00000477436 290 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AC011005.2-201ENST00000487324 359 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AL049874.2-201ENST00000492636 288 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 Y_RNA.700-201ENST00000516806 100 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 IGKV2D-23-201ENST00000518179 286 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AP000620.1-201ENST00000527147 504 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 RN7SL475P-201ENST00000583379 298 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AC098848.2-201ENST00000588023 330 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AC073046.2-201ENST00000604756 527 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AC098657.3-201ENST00000620434 263 ntBASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 KPNA2P1-201ENST00000458289 1591 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms