Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PRDX3P3-201ENST00000447765 522 ntBASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 PLGLA-201ENST00000465668 449 ntBASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 AC106707.2-201ENST00000484182 374 ntBASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 HMGN1P15-201ENST00000513870 295 ntBASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 AC007458.1-201ENST00000542812 373 ntBASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 AC023158.1-201ENST00000561632 1025 ntBASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 MTND6P33-201ENST00000571794 183 ntBASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 MIR3944-201ENST00000581277 108 ntBASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 MIR5187-201ENST00000583479 76 ntBASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 OR4H6P-202ENST00000603819 340 ntBASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 AL137849.1-201ENST00000604767 169 ntBASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 AL669942.2-201ENST00000620352 697 ntBASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 AC007823.1-201ENST00000569932 1566 ntBASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.44□□□□□ -1.7
SHROOM1Q2M3G4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 RNU6-317P-201ENST00000384031 107 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 ZNF602P-201ENST00000405929 924 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 Z86062.1-201ENST00000406773 777 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 USP9YP19-201ENST00000412165 485 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 MTATP6P19-201ENST00000413797 659 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AL590762.3-201ENST00000436372 640 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AC069285.2-201ENST00000440210 275 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 MTND5P8-201ENST00000449817 1083 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AL451050.1-201ENST00000450126 415 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 SNORD108-201ENST00000459332 71 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 RPS4XP10-201ENST00000465034 731 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 RPS26P28-201ENST00000470806 348 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 RPL21P103-201ENST00000479921 488 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 RN7SL293P-201ENST00000481765 281 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 RN7SL271P-201ENST00000487601 295 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AC017037.1-201ENST00000508460 471 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 OR5H4P-201ENST00000510851 923 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 OR8I1P-201ENST00000529291 931 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 RFPL1S-203ENST00000539579 330 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AL162574.2-201ENST00000614618 657 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AL591424.2-201ENST00000617023 128 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AL139089.1-201ENST00000620372 975 ntBASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.43□□□□□ -1.7
SHROOM1Q2M3G4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 RNU6-185P-201ENST00000384421 107 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 MIR7-3-201ENST00000384898 110 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 AL590290.1-201ENST00000405336 380 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 AL645931.1-201ENST00000439737 410 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 PDSS1P2-201ENST00000449397 678 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 OR9N1P-202ENST00000494289 481 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 SUMO1P1-201ENST00000497904 306 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 RN7SKP13-201ENST00000515933 244 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 SNORA70.18-201ENST00000516696 98 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 AP003168.1-201ENST00000530091 307 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms