Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.74□□□□□ -1.97
SSBP1Q04837 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
SSBP1Q04837 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSBP1Q04837 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SSBP1Q04837 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SSBP1Q04837 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SSBP1Q04837 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SSBP1Q04837 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.73□□□□□ -1.97
SSBP1Q04837 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.73□□□□□ -1.97
SSBP1Q04837 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
SSBP1Q04837 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.73□□□□□ -1.97
SSBP1Q04837 SPRR2C-201ENST00000290702 219 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SSBP1Q04837 RNU1-13P-201ENST00000384499 162 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 RNA5SP274-201ENST00000410484 108 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SSBP1Q04837 SEC63P1-201ENST00000425785 1258 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.73□□□□□ -1.97
SSBP1Q04837 RPL23AP69-201ENST00000431134 458 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 AC243772.1-201ENST00000451620 410 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 ELOCP23-201ENST00000452014 332 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.73□□□□□ -1.97
SSBP1Q04837 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.73□□□□□ -1.97
SSBP1Q04837 RPL21P18-201ENST00000469899 480 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 RN7SL132P-201ENST00000478131 296 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 RPL7P23-201ENST00000493874 747 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 MGST2-204ENST00000506797 634 ntTSL 2 BASIC2.73□□□□□ -1.97
SSBP1Q04837 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.73□□□□□ -1.97
SSBP1Q04837 LDHBP3-201ENST00000514909 822 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 RN7SKP5-201ENST00000517045 272 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 KCTD9P6-201ENST00000522306 950 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
SSBP1Q04837 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.73□□□□□ -1.97
SSBP1Q04837 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.73□□□□□ -1.97
SSBP1Q04837 AC069234.5-201ENST00000611056 416 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 AC005962.2-201ENST00000611427 652 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.73□□□□□ -1.97
SSBP1Q04837 AC119674.1-207ENST00000641355 633 ntBASIC2.73□□□□□ -1.97
SSBP1Q04837 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
SSBP1Q04837 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.73□□□□□ -1.97
SSBP1Q04837 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SSBP1Q04837 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
SSBP1Q04837 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
SSBP1Q04837 AC006042.3-201ENST00000454684 1469 ntBASIC2.72□□□□□ -1.97
SSBP1Q04837 RNU6-1263P-201ENST00000384601 106 ntBASIC2.72□□□□□ -1.97
SSBP1Q04837 AC093719.1-202ENST00000392735 373 ntBASIC2.72□□□□□ -1.97
SSBP1Q04837 MIR887-201ENST00000401258 79 ntBASIC2.72□□□□□ -1.97
SSBP1Q04837 RPL5P19-201ENST00000404228 893 ntBASIC2.72□□□□□ -1.97
SSBP1Q04837 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.72□□□□□ -1.97
SSBP1Q04837 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.72□□□□□ -1.97
SSBP1Q04837 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.72□□□□□ -1.97
SSBP1Q04837 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.72□□□□□ -1.97
SSBP1Q04837 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.72□□□□□ -1.97
SSBP1Q04837 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SSBP1Q04837 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.72□□□□□ -1.97
SSBP1Q04837 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SSBP1Q04837 AC073387.1-201ENST00000453261 709 ntBASIC2.72□□□□□ -1.97
SSBP1Q04837 RPS29P33-201ENST00000456717 146 ntBASIC2.72□□□□□ -1.97
SSBP1Q04837 TRAV31-201ENST00000502780 342 ntBASIC2.72□□□□□ -1.97
SSBP1Q04837 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
SSBP1Q04837 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.72□□□□□ -1.97
SSBP1Q04837 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.72□□□□□ -1.97
SSBP1Q04837 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.72□□□□□ -1.97
SSBP1Q04837 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.72□□□□□ -1.97
SSBP1Q04837 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.72□□□□□ -1.97
SSBP1Q04837 MIR4286-201ENST00000580651 93 ntBASIC2.72□□□□□ -1.97
SSBP1Q04837 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.72□□□□□ -1.97
SSBP1Q04837 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.72□□□□□ -1.97
SSBP1Q04837 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.72□□□□□ -1.97
SSBP1Q04837 AC084035.1-201ENST00000634543 607 ntBASIC2.72□□□□□ -1.97
SSBP1Q04837 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.72□□□□□ -1.97
SSBP1Q04837 AL355596.1-201ENST00000565399 3996 ntBASIC2.72□□□□□ -1.97
SSBP1Q04837 AC108206.1-201ENST00000570186 4159 ntBASIC2.71□□□□□ -1.97
SSBP1Q04837 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.71□□□□□ -1.98
SSBP1Q04837 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.71□□□□□ -1.98
SSBP1Q04837 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSBP1Q04837 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSBP1Q04837 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.71□□□□□ -1.98
SSBP1Q04837 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
SSBP1Q04837 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.71□□□□□ -1.98
SSBP1Q04837 AC099336.2-201ENST00000422457 254 ntBASIC2.71□□□□□ -1.98
SSBP1Q04837 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.71□□□□□ -1.98
SSBP1Q04837 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC2.71□□□□□ -1.98
SSBP1Q04837 AC099063.2-201ENST00000446360 662 ntBASIC2.71□□□□□ -1.98
SSBP1Q04837 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC2.71□□□□□ -1.98
SSBP1Q04837 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SSBP1Q04837 AC078785.3-201ENST00000476607 425 ntBASIC2.71□□□□□ -1.98
SSBP1Q04837 VN1R105P-201ENST00000486595 910 ntBASIC2.71□□□□□ -1.98
SSBP1Q04837 RN7SKP18-201ENST00000516005 275 ntBASIC2.71□□□□□ -1.98
SSBP1Q04837 SNORA70.17-201ENST00000516449 133 ntBASIC2.71□□□□□ -1.98
SSBP1Q04837 RN7SKP21-201ENST00000516503 220 ntBASIC2.71□□□□□ -1.98
SSBP1Q04837 AC103843.2-201ENST00000530523 682 ntBASIC2.71□□□□□ -1.98
SSBP1Q04837 AC007536.1-201ENST00000533382 349 ntBASIC2.71□□□□□ -1.98
SSBP1Q04837 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.71□□□□□ -1.98
SSBP1Q04837 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.71□□□□□ -1.98
SSBP1Q04837 AC012119.1-201ENST00000603184 222 ntBASIC2.71□□□□□ -1.98
SSBP1Q04837 MLECP1-201ENST00000615893 709 ntBASIC2.71□□□□□ -1.98
SSBP1Q04837 Z99129.2-201ENST00000619967 314 ntBASIC2.71□□□□□ -1.98
SSBP1Q04837 AC107021.2-201ENST00000567714 2095 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms