Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.69□□□□□ -1.82
PKNOX1P55347 ELOCP16-201ENST00000444494 332 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 RPS29P31-201ENST00000446147 164 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 TPT1P13-201ENST00000449760 499 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 AC006480.1-201ENST00000449887 378 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PKNOX1P55347 AC018635.1-201ENST00000468292 1030 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 AC010618.1-201ENST00000469924 477 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.69□□□□□ -1.82
PKNOX1P55347 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.69□□□□□ -1.82
PKNOX1P55347 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.69□□□□□ -1.82
PKNOX1P55347 OR5H4P-201ENST00000510851 923 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 RAB9BP1-201ENST00000519581 626 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.69□□□□□ -1.82
PKNOX1P55347 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.69□□□□□ -1.82
PKNOX1P55347 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.69□□□□□ -1.82
PKNOX1P55347 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.69□□□□□ -1.82
PKNOX1P55347 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.69□□□□□ -1.82
PKNOX1P55347 AC069366.1-201ENST00000583159 838 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 PCNAP1-202ENST00000595299 752 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 AC069304.3-201ENST00000603938 1084 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.69□□□□□ -1.82
PKNOX1P55347 AL592436.1-201ENST00000605135 558 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 AL034351.1-201ENST00000605288 668 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 AP001033.2-201ENST00000609701 1003 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.69□□□□□ -1.82
PKNOX1P55347 AC005962.2-201ENST00000611427 652 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 MIR6716-201ENST00000613413 80 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 MLECP1-201ENST00000615893 709 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PKNOX1P55347 U7.8-201ENST00000619968 63 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 AC112484.5-201ENST00000624189 228 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.69□□□□□ -1.82
PKNOX1P55347 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PKNOX1P55347 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
PKNOX1P55347 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.69□□□□□ -1.82
PKNOX1P55347 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.69□□□□□ -1.82
PKNOX1P55347 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.69□□□□□ -1.82
PKNOX1P55347 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PKNOX1P55347 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
PKNOX1P55347 AP001486.2-201ENST00000561652 5113 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PKNOX1P55347 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.68□□□□□ -1.82
PKNOX1P55347 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.68□□□□□ -1.82
PKNOX1P55347 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PKNOX1P55347 U3.15-201ENST00000365398 212 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 RNU6-796P-201ENST00000391086 107 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
PKNOX1P55347 MIR937-201ENST00000401271 86 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 RPL21P65-201ENST00000406094 466 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 MTATP6P31-201ENST00000406985 692 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.68□□□□□ -1.82
PKNOX1P55347 AC004022.2-201ENST00000413824 193 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 AL158825.1-201ENST00000414735 521 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 AC127526.1-201ENST00000417526 366 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 MTND2P15-201ENST00000418575 892 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 AC114814.2-201ENST00000419195 485 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 PTP4A1P5-201ENST00000420305 455 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.68□□□□□ -1.82
PKNOX1P55347 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PKNOX1P55347 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.68□□□□□ -1.82
PKNOX1P55347 SNORA71B-202ENST00000439232 272 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 RPS27P5-201ENST00000444247 244 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.68□□□□□ -1.82
PKNOX1P55347 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.68□□□□□ -1.82
PKNOX1P55347 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.68□□□□□ -1.82
PKNOX1P55347 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.68□□□□□ -1.82
PKNOX1P55347 MTND2P30-201ENST00000456663 382 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 RPL7P19-201ENST00000469948 618 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.68□□□□□ -1.82
PKNOX1P55347 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.68□□□□□ -1.82
PKNOX1P55347 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.68□□□□□ -1.82
PKNOX1P55347 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.68□□□□□ -1.82
PKNOX1P55347 RAC1P2-201ENST00000511164 579 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 MTND2P31-201ENST00000512602 616 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 RNA5SP208-201ENST00000516156 78 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.68□□□□□ -1.82
PKNOX1P55347 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PKNOX1P55347 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.68□□□□□ -1.82
PKNOX1P55347 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.68□□□□□ -1.82
PKNOX1P55347 AF230666.2-201ENST00000602328 725 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 AL049634.3-201ENST00000604968 457 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.68□□□□□ -1.82
PKNOX1P55347 AL445423.1-201ENST00000609941 536 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.68□□□□□ -1.82
PKNOX1P55347 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.68□□□□□ -1.82
PKNOX1P55347 U6.107-201ENST00000637108 79 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PKNOX1P55347 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
PKNOX1P55347 AC022031.1-201ENST00000585985 2593 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 AC138393.1-206ENST00000540997 1886 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 HSPA8P19-201ENST00000505359 1517 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 DCAF13P3-201ENST00000561147 1334 ntBASIC3.68□□□□□ -1.82
PKNOX1P55347 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PKNOX1P55347 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.67□□□□□ -1.82
PKNOX1P55347 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PKNOX1P55347 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PKNOX1P55347 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 SNORD6-201ENST00000365444 73 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms