Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CDH13P55290 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CDH13P55290 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH13P55290 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH13P55290 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH13P55290 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH13P55290 OR4K15-201ENST00000305051 1216 ntBASIC4.18□□□□□ -1.74
CDH13P55290 RNU6-582P-201ENST00000362989 107 ntBASIC4.18□□□□□ -1.74
CDH13P55290 RNU6-984P-201ENST00000363236 109 ntBASIC4.18□□□□□ -1.74
CDH13P55290 RNU6-115P-201ENST00000364310 107 ntBASIC4.18□□□□□ -1.74
CDH13P55290 AL133270.1-201ENST00000402635 279 ntBASIC4.18□□□□□ -1.74
CDH13P55290 AL136310.1-201ENST00000404926 654 ntBASIC4.18□□□□□ -1.74
CDH13P55290 OR4K6P-201ENST00000416478 897 ntBASIC4.18□□□□□ -1.74
CDH13P55290 RPS3AP9-201ENST00000417027 792 ntBASIC4.18□□□□□ -1.74
CDH13P55290 RBMY1KP-201ENST00000423480 476 ntBASIC4.18□□□□□ -1.74
CDH13P55290 DPRXP1-201ENST00000426312 460 ntBASIC4.18□□□□□ -1.74
CDH13P55290 HIGD1AP12-201ENST00000427832 281 ntBASIC4.18□□□□□ -1.74
CDH13P55290 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH13P55290 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH13P55290 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH13P55290 AL589880.1-201ENST00000448271 287 ntBASIC4.18□□□□□ -1.74
CDH13P55290 AC073264.2-201ENST00000448886 166 ntBASIC4.18□□□□□ -1.74
CDH13P55290 AL009048.1-201ENST00000450437 298 ntBASIC4.18□□□□□ -1.74
CDH13P55290 ZNF886P-201ENST00000450781 723 ntBASIC4.18□□□□□ -1.74
CDH13P55290 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH13P55290 FGF7P3-201ENST00000454645 303 ntBASIC4.18□□□□□ -1.74
CDH13P55290 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.18□□□□□ -1.74
CDH13P55290 AC104164.2-201ENST00000496953 495 ntBASIC4.18□□□□□ -1.74
CDH13P55290 BOLA3P3-201ENST00000505182 232 ntBASIC4.18□□□□□ -1.74
CDH13P55290 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH13P55290 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH13P55290 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.18□□□□□ -1.74
CDH13P55290 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH13P55290 OR5M7P-201ENST00000526140 972 ntBASIC4.18□□□□□ -1.74
CDH13P55290 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH13P55290 OR5D15P-201ENST00000531671 942 ntBASIC4.18□□□□□ -1.74
CDH13P55290 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH13P55290 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH13P55290 AL109766.1-201ENST00000555080 552 ntBASIC4.18□□□□□ -1.74
CDH13P55290 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH13P55290 MIR4760-201ENST00000585040 80 ntBASIC4.18□□□□□ -1.74
CDH13P55290 MIR4443-201ENST00000585052 53 ntBASIC4.18□□□□□ -1.74
CDH13P55290 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH13P55290 AC113194.1-201ENST00000606037 500 ntBASIC4.18□□□□□ -1.74
CDH13P55290 AC012409.3-201ENST00000611343 981 ntBASIC4.18□□□□□ -1.74
CDH13P55290 AL161616.1-201ENST00000611867 286 ntBASIC4.18□□□□□ -1.74
CDH13P55290 MIR6780A-201ENST00000615089 68 ntBASIC4.18□□□□□ -1.74
CDH13P55290 AL121873.1-201ENST00000616013 524 ntBASIC4.18□□□□□ -1.74
CDH13P55290 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH13P55290 AC090506.2-201ENST00000624521 419 ntBASIC4.18□□□□□ -1.74
CDH13P55290 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH13P55290 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CDH13P55290 LINC02211-204ENST00000642024 1070 ntBASIC4.18□□□□□ -1.74
CDH13P55290 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH13P55290 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH13P55290 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH13P55290 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH13P55290 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH13P55290 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CDH13P55290 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH13P55290 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH13P55290 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH13P55290 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH13P55290 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH13P55290 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH13P55290 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH13P55290 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH13P55290 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH13P55290 RNA5SP388-201ENST00000362584 119 ntBASIC4.17□□□□□ -1.74
CDH13P55290 RN7SKP103-201ENST00000363848 320 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH13P55290 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CDH13P55290 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH13P55290 AC069213.2-201ENST00000420238 366 ntBASIC4.17□□□□□ -1.74
CDH13P55290 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH13P55290 NANOGP6-201ENST00000429190 847 ntBASIC4.17□□□□□ -1.74
CDH13P55290 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.17□□□□□ -1.74
CDH13P55290 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH13P55290 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH13P55290 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CDH13P55290 AC079776.3-201ENST00000450665 370 ntBASIC4.17□□□□□ -1.74
CDH13P55290 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.17□□□□□ -1.74
CDH13P55290 AC133473.1-201ENST00000455173 299 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AC087879.1-201ENST00000474343 374 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AC134050.1-201ENST00000495088 933 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH13P55290 VWA8P1-201ENST00000510889 176 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AC018797.3-201ENST00000513388 1241 ntBASIC4.17□□□□□ -1.74
CDH13P55290 NDUFB4P12-201ENST00000513465 390 ntBASIC4.17□□□□□ -1.74
CDH13P55290 RNU6-885P-201ENST00000516607 104 ntBASIC4.17□□□□□ -1.74
CDH13P55290 IGLVIV-65-201ENST00000517313 360 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.17□□□□□ -1.74
CDH13P55290 ARL2BPP5-201ENST00000523141 481 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AP001372.4-201ENST00000524889 472 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH13P55290 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH13P55290 AP006289.1-201ENST00000538089 277 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AC006064.5-201ENST00000541782 248 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH13P55290 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms