Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
CLCN3P51790 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCN3P51790 XKRYP1-201ENST00000423438 492 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCN3P51790 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCN3P51790 CETN4P-201ENST00000432407 469 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 XKRYP2-201ENST00000432915 492 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 USP9YP24-201ENST00000434374 697 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 AC234064.1-201ENST00000436312 247 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCN3P51790 AC006011.1-201ENST00000442758 349 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 USP9YP17-201ENST00000444617 696 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 HMGB3P6-201ENST00000444896 598 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 CDC27P1-201ENST00000445384 715 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 AC022795.1-201ENST00000473808 480 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLCN3P51790 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLCN3P51790 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLCN3P51790 AC113420.1-201ENST00000507903 571 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 FTH1P21-201ENST00000512179 511 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCN3P51790 AC112673.1-201ENST00000513168 575 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLCN3P51790 RNU6-416P-201ENST00000516265 103 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 snoZ278.1-201ENST00000517059 112 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 AP001636.2-201ENST00000525517 696 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 RPL21P7-201ENST00000557463 483 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 MIR1254-2-201ENST00000579553 63 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 AC008759.1-201ENST00000589783 983 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 SLC25A36P1-201ENST00000590111 465 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCN3P51790 RNU4-5P-201ENST00000607255 135 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 AL157392.4-201ENST00000609756 345 ntBASIC4.58□□□□□ -1.68
CLCN3P51790 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
CLCN3P51790 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCN3P51790 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CLCN3P51790 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CLCN3P51790 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLCN3P51790 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CLCN3P51790 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCN3P51790 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCN3P51790 SGO1P1-201ENST00000603525 1447 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCN3P51790 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCN3P51790 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCN3P51790 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCN3P51790 RNU1-64P-201ENST00000365443 163 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.57□□□□□ -1.68
CLCN3P51790 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
CLCN3P51790 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLCN3P51790 RNU6-224P-201ENST00000384055 107 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 MIR16-1-201ENST00000385271 89 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.57□□□□□ -1.68
CLCN3P51790 RPL32P23-201ENST00000397237 405 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CLCN3P51790 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.57□□□□□ -1.68
CLCN3P51790 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 RBMY1KP-201ENST00000423480 476 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 NANOGP5-201ENST00000424456 877 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCN3P51790 AL035246.1-201ENST00000433554 1255 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 MTCO2P20-201ENST00000437339 673 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 OR10R1P-201ENST00000441524 1141 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCN3P51790 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCN3P51790 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCN3P51790 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCN3P51790 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCN3P51790 AC006511.1-201ENST00000470614 315 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 AC104689.1-201ENST00000473356 768 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 MTCYBP35-201ENST00000503630 1137 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 BNIP3P41-201ENST00000503774 571 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCN3P51790 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCN3P51790 AC118282.2-201ENST00000508739 374 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCN3P51790 AC119751.5-201ENST00000514077 770 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 HMGB1P19-201ENST00000517578 577 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 MTCO3P15-201ENST00000526563 574 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 AC023538.1-201ENST00000534576 736 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.57□□□□□ -1.68
CLCN3P51790 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.57□□□□□ -1.68
CLCN3P51790 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCN3P51790 AL450336.1-201ENST00000605180 586 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 AC106052.1-201ENST00000608029 497 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 AL138478.1-201ENST00000612252 832 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 AC079395.3-201ENST00000615161 484 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 AC009464.1-201ENST00000615731 469 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 AC010975.3-201ENST00000618727 978 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 AP000676.4-201ENST00000624659 623 ntBASIC4.57□□□□□ -1.68
CLCN3P51790 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CLCN3P51790 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCN3P51790 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
CLCN3P51790 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCN3P51790 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CLCN3P51790 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCN3P51790 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCN3P51790 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCN3P51790 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLCN3P51790 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms