Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.42□□□□□ -1.86
CX3CR1P49238 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.42□□□□□ -1.86
CX3CR1P49238 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.42□□□□□ -1.86
CX3CR1P49238 OR6C73P-201ENST00000546432 358 ntBASIC3.42□□□□□ -1.86
CX3CR1P49238 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.42□□□□□ -1.86
CX3CR1P49238 AC009101.1-201ENST00000568135 242 ntBASIC3.42□□□□□ -1.86
CX3CR1P49238 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CX3CR1P49238 AC244505.7-201ENST00000599675 272 ntBASIC3.42□□□□□ -1.86
CX3CR1P49238 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.42□□□□□ -1.86
CX3CR1P49238 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.42□□□□□ -1.86
CX3CR1P49238 AL034351.1-201ENST00000605288 668 ntBASIC3.42□□□□□ -1.86
CX3CR1P49238 MIR1264-201ENST00000616374 69 ntBASIC3.42□□□□□ -1.86
CX3CR1P49238 AC090506.2-201ENST00000624521 419 ntBASIC3.42□□□□□ -1.86
CX3CR1P49238 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CX3CR1P49238 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
CX3CR1P49238 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.42□□□□□ -1.86
CX3CR1P49238 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.42□□□□□ -1.86
CX3CR1P49238 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CX3CR1P49238 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CR1P49238 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CR1P49238 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CR1P49238 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CR1P49238 AL512646.1-201ENST00000269395 1077 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CR1P49238 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CR1P49238 Z98941.1-201ENST00000407764 100 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CR1P49238 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CR1P49238 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CR1P49238 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CR1P49238 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CR1P49238 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CR1P49238 TBCAP1-201ENST00000436520 327 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CR1P49238 AL691517.1-201ENST00000440833 1235 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 AL513321.1-201ENST00000441175 761 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 RPS27P5-201ENST00000444247 244 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 AC006326.1-201ENST00000445465 787 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CX3CR1P49238 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.41□□□□□ -1.86
CX3CR1P49238 DNAJC19P1-201ENST00000455312 319 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 TPRKBP1-201ENST00000456243 481 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 RPL21P11-201ENST00000461458 483 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CR1P49238 AC004069.2-201ENST00000505438 1114 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 AC008565.1-201ENST00000509046 885 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 IGKV2D-23-201ENST00000518179 286 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 SOD1P3-201ENST00000518682 454 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 AC087369.1-201ENST00000520775 996 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CR1P49238 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CR1P49238 OR4A12P-201ENST00000530847 918 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CR1P49238 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CR1P49238 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CR1P49238 AC125494.3-201ENST00000602759 455 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 YWHAQP7-201ENST00000603536 658 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 AC100814.1-201ENST00000606963 623 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 AC023043.4-201ENST00000612081 449 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 AC104307.1-201ENST00000616142 196 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 AC022079.2-201ENST00000619739 566 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 U7.8-201ENST00000619968 63 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.41□□□□□ -1.86
CX3CR1P49238 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CR1P49238 OR52H1-202ENST00000641796 1061 ntBASIC3.41□□□□□ -1.86
CX3CR1P49238 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
CX3CR1P49238 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CR1P49238 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CR1P49238 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CX3CR1P49238 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.41□□□□□ -1.86
CX3CR1P49238 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CR1P49238 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CR1P49238 NSRP1P1-201ENST00000444067 1693 ntBASIC3.4□□□□□ -1.86
CX3CR1P49238 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.86
CX3CR1P49238 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
CX3CR1P49238 AC016716.1-201ENST00000265882 708 ntBASIC3.4□□□□□ -1.87
CX3CR1P49238 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CX3CR1P49238 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CX3CR1P49238 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CX3CR1P49238 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CX3CR1P49238 AL022722.2-201ENST00000402519 180 ntBASIC3.4□□□□□ -1.87
CX3CR1P49238 AC016397.1-201ENST00000412463 242 ntBASIC3.4□□□□□ -1.87
CX3CR1P49238 OR8G2P-201ENST00000412796 908 ntBASIC3.4□□□□□ -1.87
CX3CR1P49238 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.4□□□□□ -1.87
CX3CR1P49238 AC005189.1-201ENST00000431286 310 ntBASIC3.4□□□□□ -1.87
CX3CR1P49238 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.4□□□□□ -1.87
CX3CR1P49238 EXTL2P1-201ENST00000446218 416 ntBASIC3.4□□□□□ -1.87
CX3CR1P49238 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.4□□□□□ -1.87
CX3CR1P49238 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.4□□□□□ -1.87
CX3CR1P49238 AC010618.1-201ENST00000469924 477 ntBASIC3.4□□□□□ -1.87
CX3CR1P49238 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.4□□□□□ -1.87
CX3CR1P49238 PPIAP15-201ENST00000479662 484 ntBASIC3.4□□□□□ -1.87
CX3CR1P49238 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.4□□□□□ -1.87
CX3CR1P49238 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
CX3CR1P49238 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.4□□□□□ -1.87
CX3CR1P49238 AC021146.1-201ENST00000511202 716 ntBASIC3.4□□□□□ -1.87
CX3CR1P49238 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.4□□□□□ -1.87
CX3CR1P49238 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.4□□□□□ -1.87
CX3CR1P49238 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms