Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 YWHAEP5-201ENST00000431545 765 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC006994.1-201ENST00000438212 839 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 AL158053.1-201ENST00000441503 453 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 HMGB1P48-201ENST00000446155 598 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 RPS6P2-201ENST00000454208 705 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC073522.1-201ENST00000483312 377 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 HMGB1P21-201ENST00000502313 581 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 RN7SKP157-201ENST00000516174 282 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC092451.2-201ENST00000538746 658 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC022968.1-201ENST00000567372 442 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC079171.1-201ENST00000568788 914 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 MIR3944-201ENST00000581277 108 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC067852.4-201ENST00000590314 478 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 AC104662.1-201ENST00000604448 511 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 AP005229.2-201ENST00000609980 697 ntBASIC4.01□□□□□ -1.77
TNFRSF4P43489 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.01□□□□□ -1.77
TNFRSF4P43489 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
TNFRSF4P43489 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TNFRSF4P43489 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TNFRSF4P43489 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TNFRSF4P43489 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
TNFRSF4P43489 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
TNFRSF4P43489 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
TNFRSF4P43489 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4□□□□□ -1.77
TNFRSF4P43489 AL512646.1-201ENST00000269395 1077 ntBASIC4□□□□□ -1.77
TNFRSF4P43489 SNORA3C-201ENST00000408792 125 ntBASIC4□□□□□ -1.77
TNFRSF4P43489 AC069157.1-201ENST00000421749 137 ntBASIC4□□□□□ -1.77
TNFRSF4P43489 HSFY3P-201ENST00000444242 1191 ntBASIC4□□□□□ -1.77
TNFRSF4P43489 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4□□□□□ -1.77
TNFRSF4P43489 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4□□□□□ -1.77
TNFRSF4P43489 GTF2IP12-201ENST00000456547 356 ntBASIC4□□□□□ -1.77
TNFRSF4P43489 DEFB109F-201ENST00000491870 277 ntBASIC4□□□□□ -1.77
TNFRSF4P43489 MTND3P3-201ENST00000505004 126 ntBASIC4□□□□□ -1.77
TNFRSF4P43489 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TNFRSF4P43489 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4□□□□□ -1.77
TNFRSF4P43489 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4□□□□□ -1.77
TNFRSF4P43489 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4□□□□□ -1.77
TNFRSF4P43489 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4□□□□□ -1.77
TNFRSF4P43489 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4□□□□□ -1.77
TNFRSF4P43489 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4□□□□□ -1.77
TNFRSF4P43489 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
TNFRSF4P43489 AF001550.2-201ENST00000636643 217 ntBASIC4□□□□□ -1.77
TNFRSF4P43489 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
TNFRSF4P43489 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
TNFRSF4P43489 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4□□□□□ -1.77
TNFRSF4P43489 AC087190.4-201ENST00000574616 8334 ntBASIC4□□□□□ -1.77
TNFRSF4P43489 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
TNFRSF4P43489 AL592494.2-201ENST00000425455 1548 ntBASIC4□□□□□ -1.77
TNFRSF4P43489 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TNFRSF4P43489 AP001642.1-201ENST00000624727 2117 ntBASIC4□□□□□ -1.77
TNFRSF4P43489 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFRSF4P43489 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFRSF4P43489 AC073055.1-201ENST00000456901 1621 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFRSF4P43489 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFRSF4P43489 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFRSF4P43489 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFRSF4P43489 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFRSF4P43489 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
TNFRSF4P43489 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.99□□□□□ -1.77
TNFRSF4P43489 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFRSF4P43489 SNORA63.3-201ENST00000362682 132 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 RNA5SP119-201ENST00000362715 117 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 RN7SKP74-201ENST00000362849 309 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.99□□□□□ -1.77
TNFRSF4P43489 U1.1-201ENST00000384101 164 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 U8.11-201ENST00000384699 133 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 U8.12-201ENST00000384701 133 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 MIR7-3-201ENST00000384898 110 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 DNAJC19P6-201ENST00000401853 280 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 AL450992.3-201ENST00000413192 568 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 RPL7AP73-201ENST00000413490 353 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
TNFRSF4P43489 AC092647.1-201ENST00000420654 287 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 PDSS1P1-201ENST00000422953 1114 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 RPS6P14-201ENST00000425165 719 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 DEFB130D-201ENST00000426866 237 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.99□□□□□ -1.77
TNFRSF4P43489 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.99□□□□□ -1.77
TNFRSF4P43489 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.99□□□□□ -1.77
TNFRSF4P43489 U8.18-201ENST00000459285 133 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.99□□□□□ -1.77
TNFRSF4P43489 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 AC005351.1-201ENST00000511152 786 ntBASIC3.99□□□□□ -1.77
TNFRSF4P43489 RNU1-95P-201ENST00000516357 160 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms