Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RNU2-27P-201ENST00000516185 142 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 RNU6-889P-201ENST00000517189 103 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC1A1P43005 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC1A1P43005 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC1A1P43005 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC1A1P43005 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.81□□□□□ -1.8
SLC1A1P43005 AC023161.2-201ENST00000551218 780 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC1A1P43005 AGGF1P6-201ENST00000569213 976 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC1A1P43005 MIR4286-201ENST00000580651 93 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC1A1P43005 ABI1P1-201ENST00000603375 1120 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 AC083809.1-201ENST00000615051 472 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 MIR6875-201ENST00000617506 72 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC1A1P43005 AC073073.2-201ENST00000609827 2578 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
SLC1A1P43005 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC1A1P43005 AL136964.1-201ENST00000622038 2990 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC1A1P43005 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SLC1A1P43005 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC1A1P43005 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
SLC1A1P43005 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SLC1A1P43005 FAM91A3P-201ENST00000456826 2544 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC1A1P43005 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC1A1P43005 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC1A1P43005 RNU6-452P-201ENST00000384406 107 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 MIR141-201ENST00000384975 95 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 AL136116.1-201ENST00000403591 381 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 RNU6-628P-201ENST00000410675 107 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC1A1P43005 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 MTND2P15-201ENST00000418575 892 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC1A1P43005 RPL30P3-201ENST00000424262 333 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 SDCBPP2-201ENST00000424643 885 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 C4BPAP2-201ENST00000428434 478 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC1A1P43005 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC1A1P43005 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC1A1P43005 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC1A1P43005 MTND2P8-201ENST00000450555 1025 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 RN7SL132P-201ENST00000478131 296 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 VN1R105P-201ENST00000486595 910 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 AC023050.1-201ENST00000498198 304 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC1A1P43005 PCBP2P3-201ENST00000509726 843 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 RN7SKP141-201ENST00000516167 338 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC1A1P43005 PDCL2P2-201ENST00000533651 189 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC1A1P43005 OR8R1P-201ENST00000543943 764 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC1A1P43005 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC1A1P43005 MIR3186-201ENST00000577404 85 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 MIR4458-201ENST00000578872 75 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC1A1P43005 NF1P5-201ENST00000588287 448 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 MTCO3P22-201ENST00000603219 784 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC1A1P43005 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC1A1P43005 ZYXP1-201ENST00000617638 118 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 AP004607.9-201ENST00000618202 316 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 CR392039.4-201ENST00000624968 501 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC1A1P43005 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
SLC1A1P43005 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SLC1A1P43005 AL353743.4-201ENST00000422653 1547 ntBASIC3.8□□□□□ -1.8
SLC1A1P43005 RNF6P1-201ENST00000444889 1784 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC1A1P43005 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC1A1P43005 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC1A1P43005 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC1A1P43005 AC245054.1-201ENST00000420944 258 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 AL139247.1-201ENST00000422768 325 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 RSL24D1P6-201ENST00000426934 401 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 RPS24P8-201ENST00000431490 402 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC1A1P43005 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC1A1P43005 MED6P1-201ENST00000439659 713 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 H2AFZP6-201ENST00000444403 394 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC1A1P43005 TPMTP4-201ENST00000450749 678 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 HMGN2P7-201ENST00000456186 273 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 CEACAMP10-202ENST00000495431 496 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC1A1P43005 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC1A1P43005 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC1A1P43005 AP006245.1-201ENST00000522549 120 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 AL139174.1-201ENST00000531489 886 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.79□□□□□ -1.8
SLC1A1P43005 AC106785.3-201ENST00000564064 847 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC1A1P43005 MIR4425-201ENST00000580572 84 ntBASIC3.79□□□□□ -1.8
SLC1A1P43005 AC006077.1-201ENST00000604746 343 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms