Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 AC093767.1-201ENST00000504523 156 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 AC114781.3-201ENST00000512083 142 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 RNU6-1281P-201ENST00000516223 105 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 RNU6-875P-201ENST00000516488 106 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 RNA5SP434-201ENST00000516647 121 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC12P31275 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC12P31275 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC12P31275 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC12P31275 AC107918.3-201ENST00000533272 382 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXC12P31275 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXC12P31275 AL359212.1-201ENST00000556608 614 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXC12P31275 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 AC090651.1-201ENST00000567865 634 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 RN7SL802P-201ENST00000577858 299 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 AC110743.1-201ENST00000584870 478 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 AC060780.3-201ENST00000589464 80 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXC12P31275 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 AL356055.1-201ENST00000602528 446 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 BX664608.1-201ENST00000610519 487 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 MIR6730-201ENST00000622213 67 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 MIR3662-201ENST00000637030 95 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HOXC12P31275 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HOXC12P31275 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HOXC12P31275 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC12P31275 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HOXC12P31275 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC12P31275 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
HOXC12P31275 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC12P31275 AL031595.2-201ENST00000624215 19071 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HOXC12P31275 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC12P31275 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC12P31275 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HOXC12P31275 Y_RNA.481-201ENST00000384373 102 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 SSXP10-201ENST00000402595 565 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 RN7SKP151-201ENST00000410230 316 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 AC013429.2-201ENST00000418798 781 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 ZNF90P2-204ENST00000419323 1075 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 NMD3P2-201ENST00000421815 761 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 AL035660.1-201ENST00000422041 222 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 AC099336.2-201ENST00000422457 254 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 OR10T1P-201ENST00000424327 947 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC12P31275 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC12P31275 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC12P31275 USP9YP15-201ENST00000442391 422 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HOXC12P31275 AL163193.1-201ENST00000444895 788 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 TPT1P14-201ENST00000448018 505 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 TCEA1P1-201ENST00000449716 880 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 AC239809.1-201ENST00000450470 217 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC12P31275 PRPF38AP1-201ENST00000451976 933 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC12P31275 RPS27AP3-201ENST00000453803 454 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 AC099560.2-201ENST00000457554 255 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 AP000852.1-201ENST00000472460 573 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 AC079382.1-201ENST00000493346 557 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.3□□□□□ -1.56
HOXC12P31275 TXNP6-201ENST00000510190 310 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC12P31275 AC112191.2-201ENST00000522428 333 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC12P31275 AC063949.1-201ENST00000552900 865 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 SUB1P2-201ENST00000556401 297 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC12P31275 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC12P31275 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC12P31275 AC053481.3-201ENST00000577881 843 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC12P31275 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC12P31275 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC12P31275 RPL23AP92-201ENST00000603609 255 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 AC112230.1-201ENST00000604342 547 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 AP006248.2-201ENST00000623309 592 ntBASIC5.3□□□□□ -1.56
HOXC12P31275 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC12P31275 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC12P31275 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC12P31275 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms