Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
HOXA9P31269 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXA9P31269 UBE3AP2-201ENST00000429033 2259 ntBASIC3.9□□□□□ -1.79
HOXA9P31269 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA9P31269 EXOC5P1-201ENST00000510543 1969 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 IPO8P1-201ENST00000455509 3109 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA9P31269 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA9P31269 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXA9P31269 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA9P31269 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA9P31269 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HOXA9P31269 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA9P31269 RNU6-386P-201ENST00000362650 107 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 AC083799.1-201ENST00000366451 910 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 SOD2P1-201ENST00000396543 562 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 RNU6-564P-201ENST00000410983 104 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 RPS12P23-201ENST00000419579 400 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXA9P31269 AC096638.2-201ENST00000434965 711 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA9P31269 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXA9P31269 AC104978.1-201ENST00000449387 391 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 PPIAP3-201ENST00000450588 505 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 AC087385.1-201ENST00000475062 312 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA9P31269 AC068305.1-201ENST00000497406 726 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 AC109458.1-201ENST00000508858 316 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 RN7SKP13-201ENST00000515933 244 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 OR7E13P-201ENST00000526052 910 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA9P31269 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXA9P31269 AC107016.1-201ENST00000550463 337 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 AC009268.1-201ENST00000561352 1203 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 AC090877.1-201ENST00000561418 344 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXA9P31269 MIR5195-201ENST00000583555 115 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 AL133247.2-201ENST00000603236 482 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA9P31269 MIR7851-201ENST00000610611 160 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 AC123768.4-201ENST00000616244 701 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXA9P31269 AP000553.6-201ENST00000641242 118 ntBASIC3.89□□□□□ -1.79
HOXA9P31269 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HOXA9P31269 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA9P31269 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXA9P31269 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA9P31269 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA9P31269 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXA9P31269 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXA9P31269 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA9P31269 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA9P31269 AL365440.1-201ENST00000436135 2167 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 RNVU1-14-201ENST00000384770 164 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 MIR124-3-201ENST00000384866 87 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 ZNF603P-201ENST00000405613 487 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.88□□□□□ -1.79
HOXA9P31269 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.88□□□□□ -1.79
HOXA9P31269 AC092832.1-201ENST00000422934 400 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXA9P31269 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA9P31269 MTND2P25-201ENST00000449028 610 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 RBMY2UP-201ENST00000453474 324 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 AL133477.1-201ENST00000457472 514 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 LARP7P4-201ENST00000481075 878 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 RPL32P34-201ENST00000486380 400 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
HOXA9P31269 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXA9P31269 RNA5SP309-201ENST00000516670 106 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 OR4A2P-201ENST00000527276 913 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 AC103843.2-201ENST00000530523 682 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 AC091515.1-201ENST00000548110 679 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.88□□□□□ -1.79
HOXA9P31269 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXA9P31269 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXA9P31269 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
HOXA9P31269 AC245128.3-201ENST00000594721 748 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA9P31269 AL031985.2-201ENST00000600955 480 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA9P31269 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXA9P31269 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA9P31269 AC079684.1-201ENST00000621405 437 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 AC103858.2-201ENST00000621471 543 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 AC119674.1-207ENST00000641355 633 ntBASIC3.88□□□□□ -1.79
HOXA9P31269 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA9P31269 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA9P31269 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA9P31269 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA9P31269 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA9P31269 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA9P31269 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HOXA9P31269 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HOXA9P31269 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HOXA9P31269 SNORD9-201ENST00000362566 104 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 RN7SKP222-201ENST00000410651 315 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA9P31269 AL158156.1-201ENST00000422509 473 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 RPL30P3-201ENST00000424262 333 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms