Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.28□□□□□ -1.72
ERCC2P18074 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ERCC2P18074 AP001542.2-201ENST00000593141 364 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AC007390.2-201ENST00000606229 3803 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AP000238.1-201ENST00000608759 426 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AC093673.2-201ENST00000609674 331 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AC005962.2-201ENST00000611427 652 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 MIR8059-201ENST00000620427 81 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.28□□□□□ -1.72
ERCC2P18074 AC009269.6-201ENST00000621778 588 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AC008785.1-201ENST00000624475 456 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.28□□□□□ -1.72
ERCC2P18074 AC011266.1-201ENST00000624119 3569 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ERCC2P18074 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
ERCC2P18074 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
ERCC2P18074 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ERCC2P18074 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ERCC2P18074 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
ERCC2P18074 MTND5P28-201ENST00000438005 1594 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.27□□□□□ -1.73
ERCC2P18074 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ERCC2P18074 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ERCC2P18074 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ERCC2P18074 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ERCC2P18074 RNA5SP52-201ENST00000362448 134 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 RNA5SP388-201ENST00000362584 119 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 RNA5SP443-201ENST00000363083 132 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 RNU6-1243P-201ENST00000364028 107 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 MIR141-201ENST00000384975 95 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 MIR708-201ENST00000390708 88 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.27□□□□□ -1.73
ERCC2P18074 USP9YP21-201ENST00000420603 432 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 AC009237.2-201ENST00000421358 284 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 RPL23AP38-201ENST00000423801 469 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 RPP40P1-201ENST00000426762 456 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.27□□□□□ -1.73
ERCC2P18074 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.27□□□□□ -1.73
ERCC2P18074 NUTF2P3-201ENST00000448540 384 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.27□□□□□ -1.73
ERCC2P18074 FCF1P6-201ENST00000456841 595 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 AC006517.1-201ENST00000480485 328 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 AC017037.1-201ENST00000508460 471 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.27□□□□□ -1.73
ERCC2P18074 HPRT1P1-201ENST00000509498 657 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.27□□□□□ -1.73
ERCC2P18074 AC016065.2-201ENST00000514530 444 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.27□□□□□ -1.73
ERCC2P18074 AP003730.1-201ENST00000524605 285 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.27□□□□□ -1.73
ERCC2P18074 YWHAZP1-201ENST00000556286 722 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.27□□□□□ -1.73
ERCC2P18074 MIR3939-201ENST00000582614 106 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 AC022069.1-201ENST00000582910 658 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 AC006116.5-201ENST00000591936 559 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 AL158050.2-201ENST00000605336 568 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 AC105227.2-201ENST00000615075 605 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 MIR6758-201ENST00000620653 63 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 AC099654.8-201ENST00000637757 681 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 AC013437.2-201ENST00000639587 677 ntBASIC4.27□□□□□ -1.73
ERCC2P18074 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ERCC2P18074 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ERCC2P18074 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ERCC2P18074 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.27□□□□□ -1.73
ERCC2P18074 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ERCC2P18074 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ERCC2P18074 AC011978.2-201ENST00000569835 2054 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
ERCC2P18074 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.26□□□□□ -1.73
ERCC2P18074 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.26□□□□□ -1.73
ERCC2P18074 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ERCC2P18074 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ERCC2P18074 SNORA70E-201ENST00000384492 135 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 ENSAP1-201ENST00000392855 326 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.26□□□□□ -1.73
ERCC2P18074 RPS12P5-201ENST00000423449 371 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 AC006011.1-201ENST00000442758 349 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 MTATP6P14-201ENST00000455189 673 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 NF1P3-201ENST00000457709 450 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 RPL21P103-201ENST00000479921 488 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 RPS27AP13-201ENST00000498403 237 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.26□□□□□ -1.73
ERCC2P18074 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.26□□□□□ -1.73
ERCC2P18074 AP001207.1-201ENST00000524051 481 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 OR5M7P-201ENST00000526140 972 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 NDUFS5P6-201ENST00000529136 295 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 AC118942.1-201ENST00000529674 1035 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.26□□□□□ -1.73
ERCC2P18074 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.26□□□□□ -1.73
ERCC2P18074 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.26□□□□□ -1.73
ERCC2P18074 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.26□□□□□ -1.73
ERCC2P18074 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.26□□□□□ -1.73
ERCC2P18074 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ERCC2P18074 AL606834.3-201ENST00000602615 496 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 YWHAQP7-201ENST00000603536 658 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 Z82195.1-201ENST00000604558 398 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 HSPE1P14-201ENST00000605812 302 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 AC097504.2-201ENST00000608088 454 ntBASIC4.26□□□□□ -1.73
ERCC2P18074 SNX18P1Y-201ENST00000616231 511 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms