Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL11A1P12107 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL11A1P12107 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL11A1P12107 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
COL11A1P12107 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.76□□□□□ -1.81
COL11A1P12107 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL11A1P12107 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.76□□□□□ -1.81
COL11A1P12107 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.76□□□□□ -1.81
COL11A1P12107 AC037198.2-201ENST00000478845 733 ntBASIC3.76□□□□□ -1.81
COL11A1P12107 AC113430.1-201ENST00000506872 718 ntBASIC3.76□□□□□ -1.81
COL11A1P12107 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
COL11A1P12107 AC006518.1-201ENST00000541449 943 ntBASIC3.76□□□□□ -1.81
COL11A1P12107 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.76□□□□□ -1.81
COL11A1P12107 AC004024.1-201ENST00000549244 247 ntBASIC3.76□□□□□ -1.81
COL11A1P12107 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.76□□□□□ -1.81
COL11A1P12107 SCARNA15.3-201ENST00000626315 122 ntBASIC3.76□□□□□ -1.81
COL11A1P12107 SCARNA4.1-201ENST00000628597 123 ntBASIC3.76□□□□□ -1.81
COL11A1P12107 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.76□□□□□ -1.81
COL11A1P12107 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.76□□□□□ -1.81
COL11A1P12107 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL11A1P12107 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL11A1P12107 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL11A1P12107 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL11A1P12107 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
COL11A1P12107 AL391417.1-201ENST00000404100 426 ntBASIC3.75□□□□□ -1.81
COL11A1P12107 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.75□□□□□ -1.81
COL11A1P12107 HMGB3P9-201ENST00000441799 583 ntBASIC3.75□□□□□ -1.81
COL11A1P12107 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.75□□□□□ -1.81
COL11A1P12107 AL591623.2-201ENST00000449978 222 ntBASIC3.75□□□□□ -1.81
COL11A1P12107 AC010307.1-201ENST00000467206 836 ntBASIC3.75□□□□□ -1.81
COL11A1P12107 ACTG1P13-201ENST00000486987 1043 ntBASIC3.75□□□□□ -1.81
COL11A1P12107 HMGB3P14-201ENST00000494195 599 ntBASIC3.75□□□□□ -1.81
COL11A1P12107 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.75□□□□□ -1.81
COL11A1P12107 AP005205.1-201ENST00000563503 508 ntBASIC3.75□□□□□ -1.81
COL11A1P12107 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.75□□□□□ -1.81
COL11A1P12107 AC006504.3-201ENST00000586818 523 ntBASIC3.75□□□□□ -1.81
COL11A1P12107 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.75□□□□□ -1.81
COL11A1P12107 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.75□□□□□ -1.81
COL11A1P12107 AC241377.1-201ENST00000619797 406 ntBASIC3.75□□□□□ -1.81
COL11A1P12107 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.75□□□□□ -1.81
COL11A1P12107 AL645568.2-201ENST00000432815 1337 ntBASIC3.75□□□□□ -1.81
COL11A1P12107 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL11A1P12107 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL11A1P12107 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.75□□□□□ -1.81
COL11A1P12107 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL11A1P12107 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.74□□□□□ -1.81
COL11A1P12107 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.74□□□□□ -1.81
COL11A1P12107 AC106785.3-201ENST00000564064 847 ntBASIC3.74□□□□□ -1.81
COL11A1P12107 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.74□□□□□ -1.81
COL11A1P12107 MIR2682-201ENST00000580305 110 ntBASIC3.74□□□□□ -1.81
COL11A1P12107 MTCO3P22-201ENST00000603219 784 ntBASIC3.74□□□□□ -1.81
COL11A1P12107 AL356321.1-201ENST00000621360 228 ntBASIC3.74□□□□□ -1.81
COL11A1P12107 CR383658.2-201ENST00000547576 1525 ntBASIC3.74□□□□□ -1.81
COL11A1P12107 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL11A1P12107 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL11A1P12107 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
COL11A1P12107 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
COL11A1P12107 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.74□□□□□ -1.81
COL11A1P12107 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL11A1P12107 AC017071.1-201ENST00000564407 2204 ntBASIC3.74□□□□□ -1.81
COL11A1P12107 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
COL11A1P12107 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL11A1P12107 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.74□□□□□ -1.81
COL11A1P12107 MTND2P25-201ENST00000449028 610 ntBASIC3.74□□□□□ -1.81
COL11A1P12107 RPL23AP73-201ENST00000492507 471 ntBASIC3.74□□□□□ -1.81
COL11A1P12107 FTH1P9-201ENST00000513251 355 ntBASIC3.74□□□□□ -1.81
COL11A1P12107 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.74□□□□□ -1.81
COL11A1P12107 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.74□□□□□ -1.81
COL11A1P12107 CR392039.4-201ENST00000624968 501 ntBASIC3.74□□□□□ -1.81
COL11A1P12107 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.74□□□□□ -1.81
COL11A1P12107 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.74□□□□□ -1.81
COL11A1P12107 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC3.73□□□□□ -1.81
COL11A1P12107 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL11A1P12107 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL11A1P12107 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL11A1P12107 VN1R51P-201ENST00000411675 945 ntBASIC3.73□□□□□ -1.81
COL11A1P12107 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.73□□□□□ -1.81
COL11A1P12107 AC093698.1-201ENST00000423843 571 ntBASIC3.73□□□□□ -1.81
COL11A1P12107 SKP1P1-201ENST00000438081 489 ntBASIC3.73□□□□□ -1.81
COL11A1P12107 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.73□□□□□ -1.81
COL11A1P12107 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.73□□□□□ -1.81
COL11A1P12107 AC068724.1-201ENST00000487100 792 ntBASIC3.73□□□□□ -1.81
COL11A1P12107 RPS6P4-201ENST00000494693 758 ntBASIC3.73□□□□□ -1.81
COL11A1P12107 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.73□□□□□ -1.81
COL11A1P12107 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.73□□□□□ -1.81
COL11A1P12107 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.73□□□□□ -1.81
COL11A1P12107 RNU6-964P-201ENST00000516524 69 ntBASIC3.73□□□□□ -1.81
COL11A1P12107 EIF4BP1-201ENST00000554881 351 ntBASIC3.73□□□□□ -1.81
COL11A1P12107 AC034105.3-201ENST00000565294 442 ntBASIC3.73□□□□□ -1.81
COL11A1P12107 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.73□□□□□ -1.81
COL11A1P12107 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
COL11A1P12107 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.73□□□□□ -1.81
COL11A1P12107 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL11A1P12107 SAGE4P-201ENST00000442271 3381 ntBASIC3.72□□□□□ -1.81
COL11A1P12107 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
COL11A1P12107 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL11A1P12107 SNORA7.4-201ENST00000384249 137 ntBASIC3.72□□□□□ -1.81
COL11A1P12107 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.72□□□□□ -1.81
COL11A1P12107 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
COL11A1P12107 CR383656.14-201ENST00000551951 406 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms