Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL513185.2-201ENST00000425543 193 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 TIMM9P3-201ENST00000428659 274 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 TMEM183AP1-205ENST00000432739 290 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 AC010881.1-201ENST00000433830 235 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 RAD23BP3-201ENST00000454157 1152 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 OFD1P4Y-201ENST00000455273 1179 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 snoU13.20-201ENST00000459180 104 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 PAICSP4-201ENST00000517543 1253 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 AC090502.2-201ENST00000549267 280 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 AC068714.1-201ENST00000559623 800 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 AL683813.2-201ENST00000605245 502 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 AC040896.1-201ENST00000613819 479 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 YWHAEP7-203ENST00000622054 312 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 CR392039.4-201ENST00000624968 501 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
CSB-PGBD3P0DP91 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
CSB-PGBD3P0DP91 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 AC018628.1-201ENST00000624147 3819 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 SNORA17.1-201ENST00000362945 126 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 GSTA9P-201ENST00000406231 611 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 AL807761.1-201ENST00000417622 171 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 AL596266.1-201ENST00000448132 400 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 TRGVB-201ENST00000453257 471 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 AC009127.1-201ENST00000467090 155 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 RPL17P2-201ENST00000491913 451 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 FGF7P4-201ENST00000509595 295 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 MTCO2P4-201ENST00000517968 247 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 BRD9P1-201ENST00000529855 560 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 CBX3P5-201ENST00000552017 521 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 NMNAT1P1-201ENST00000554095 876 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 H3F3BP2-201ENST00000583907 357 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 AC006115.2-201ENST00000596823 202 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 AC124312.5-201ENST00000604451 268 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 COX6CP4-201ENST00000605798 228 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 AC243773.3-201ENST00000613270 256 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 MLECP1-201ENST00000615893 709 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 AC090527.3-201ENST00000619041 548 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 AC138305.3-201ENST00000624988 240 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 AC006065.6-201ENST00000625201 545 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 AL359922.3-201ENST00000624779 1670 ntBASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CSB-PGBD3P0DP91 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 RNU6-657P-201ENST00000383904 107 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 RPS24P12-201ENST00000402084 394 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AC096921.1-201ENST00000411661 375 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 MTCO3P12-201ENST00000416718 547 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AC007161.1-204ENST00000423039 460 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AL158073.1-201ENST00000426848 1104 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AC104837.2-201ENST00000427236 424 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 MTCO2P12-201ENST00000427426 682 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms