Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM1P09493 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM1P09493 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.01□□□□□ -1.77
TPM1P09493 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM1P09493 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TPM1P09493 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM1P09493 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.01□□□□□ -1.77
TPM1P09493 BNIP3P38-201ENST00000601117 544 ntBASIC4.01□□□□□ -1.77
TPM1P09493 AC113194.1-201ENST00000606037 500 ntBASIC4.01□□□□□ -1.77
TPM1P09493 AC121761.2-201ENST00000617300 689 ntBASIC4.01□□□□□ -1.77
TPM1P09493 AC018816.2-201ENST00000621460 353 ntBASIC4.01□□□□□ -1.77
TPM1P09493 AC073342.3-201ENST00000624211 193 ntBASIC4.01□□□□□ -1.77
TPM1P09493 AP000553.6-201ENST00000641242 118 ntBASIC4.01□□□□□ -1.77
TPM1P09493 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM1P09493 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4□□□□□ -1.77
TPM1P09493 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
TPM1P09493 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4□□□□□ -1.77
TPM1P09493 RNU6-670P-201ENST00000364312 104 ntBASIC4□□□□□ -1.77
TPM1P09493 RNU6-805P-201ENST00000365643 106 ntBASIC4□□□□□ -1.77
TPM1P09493 MTHFD2P2-201ENST00000407725 247 ntBASIC4□□□□□ -1.77
TPM1P09493 OR8G2P-201ENST00000412796 908 ntBASIC4□□□□□ -1.77
TPM1P09493 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4□□□□□ -1.77
TPM1P09493 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4□□□□□ -1.77
TPM1P09493 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4□□□□□ -1.77
TPM1P09493 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4□□□□□ -1.77
TPM1P09493 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4□□□□□ -1.77
TPM1P09493 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4□□□□□ -1.77
TPM1P09493 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4□□□□□ -1.77
TPM1P09493 HMGN1P8-201ENST00000463578 288 ntBASIC4□□□□□ -1.77
TPM1P09493 AP002884.2-201ENST00000471647 395 ntBASIC4□□□□□ -1.77
TPM1P09493 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4□□□□□ -1.77
TPM1P09493 FCF1P3-201ENST00000496394 590 ntBASIC4□□□□□ -1.77
TPM1P09493 AC090071.1-201ENST00000507713 644 ntBASIC4□□□□□ -1.77
TPM1P09493 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4□□□□□ -1.77
TPM1P09493 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4□□□□□ -1.77
TPM1P09493 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4□□□□□ -1.77
TPM1P09493 RN7SKP289-201ENST00000517244 295 ntBASIC4□□□□□ -1.77
TPM1P09493 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4□□□□□ -1.77
TPM1P09493 MTND5P21-201ENST00000531961 522 ntBASIC4□□□□□ -1.77
TPM1P09493 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4□□□□□ -1.77
TPM1P09493 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4□□□□□ -1.77
TPM1P09493 AL049874.4-201ENST00000557593 255 ntBASIC4□□□□□ -1.77
TPM1P09493 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4□□□□□ -1.77
TPM1P09493 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4□□□□□ -1.77
TPM1P09493 AC023575.1-201ENST00000580510 358 ntBASIC4□□□□□ -1.77
TPM1P09493 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4□□□□□ -1.77
TPM1P09493 PCNAP1-202ENST00000595299 752 ntBASIC4□□□□□ -1.77
TPM1P09493 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4□□□□□ -1.77
TPM1P09493 AC245389.2-201ENST00000616023 576 ntBASIC4□□□□□ -1.77
TPM1P09493 AC243756.2-201ENST00000618406 463 ntBASIC4□□□□□ -1.77
TPM1P09493 AC242843.1-201ENST00000618702 573 ntBASIC4□□□□□ -1.77
TPM1P09493 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4□□□□□ -1.77
TPM1P09493 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4□□□□□ -1.77
TPM1P09493 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
TPM1P09493 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TPM1P09493 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4□□□□□ -1.77
TPM1P09493 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
TPM1P09493 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TPM1P09493 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TPM1P09493 AC000367.1-201ENST00000452711 1766 ntBASIC3.99□□□□□ -1.77
TPM1P09493 AF127577.6-201ENST00000623352 2191 ntBASIC3.99□□□□□ -1.77
TPM1P09493 AC119744.1-201ENST00000454746 1715 ntBASIC3.99□□□□□ -1.77
TPM1P09493 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TPM1P09493 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TPM1P09493 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TPM1P09493 SNORA73.2-201ENST00000364946 201 ntBASIC3.99□□□□□ -1.77
TPM1P09493 RNU6-356P-201ENST00000384140 107 ntBASIC3.99□□□□□ -1.77
TPM1P09493 SNORA70E-201ENST00000384492 135 ntBASIC3.99□□□□□ -1.77
TPM1P09493 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TPM1P09493 HMGB1P10-201ENST00000395823 563 ntBASIC3.99□□□□□ -1.77
TPM1P09493 AL022722.2-201ENST00000402519 180 ntBASIC3.99□□□□□ -1.77
TPM1P09493 SNORA3.3-201ENST00000408712 125 ntBASIC3.99□□□□□ -1.77
TPM1P09493 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.99□□□□□ -1.77
TPM1P09493 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TPM1P09493 ARL5AP2-201ENST00000444698 533 ntBASIC3.99□□□□□ -1.77
TPM1P09493 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.99□□□□□ -1.77
TPM1P09493 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.99□□□□□ -1.77
TPM1P09493 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.99□□□□□ -1.77
TPM1P09493 AC010618.1-201ENST00000469924 477 ntBASIC3.99□□□□□ -1.77
TPM1P09493 RN7SL442P-201ENST00000473804 320 ntBASIC3.99□□□□□ -1.77
TPM1P09493 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.99□□□□□ -1.77
TPM1P09493 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.99□□□□□ -1.77
TPM1P09493 AC110768.1-201ENST00000509222 400 ntBASIC3.99□□□□□ -1.77
TPM1P09493 PTGES3P3-201ENST00000511479 482 ntBASIC3.99□□□□□ -1.77
TPM1P09493 AC008011.1-201ENST00000545989 227 ntBASIC3.99□□□□□ -1.77
TPM1P09493 MIR4284-201ENST00000578924 81 ntBASIC3.99□□□□□ -1.77
TPM1P09493 AC011816.2-201ENST00000607089 556 ntBASIC3.99□□□□□ -1.77
TPM1P09493 AC112503.1-201ENST00000608436 391 ntBASIC3.99□□□□□ -1.77
TPM1P09493 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.99□□□□□ -1.77
TPM1P09493 AL732618.1-201ENST00000623251 301 ntBASIC3.99□□□□□ -1.77
TPM1P09493 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.99□□□□□ -1.77
TPM1P09493 OR52H1-202ENST00000641796 1061 ntBASIC3.99□□□□□ -1.77
TPM1P09493 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TPM1P09493 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
TPM1P09493 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TPM1P09493 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.99□□□□□ -1.77
TPM1P09493 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TPM1P09493 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
TPM1P09493 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TPM1P09493 AC024560.2-201ENST00000507981 1497 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms