Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
HMGB1P09429 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P09429 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB1P09429 RNA5SP129-201ENST00000410276 118 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P09429 LINC00993-201ENST00000420453 540 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P09429 USP9YP31-201ENST00000431405 881 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 EXTL2P1-201ENST00000446218 416 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGB1P09429 AL024509.2-201ENST00000493462 493 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 AC106872.2-201ENST00000494303 480 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P09429 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P09429 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P09429 ATP1B1P1-201ENST00000509767 915 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P09429 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P09429 AC138938.1-201ENST00000515431 782 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 SNORA70.14-201ENST00000516205 110 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P09429 AC008033.2-201ENST00000542626 177 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HMGB1P09429 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGB1P09429 SNORD84-203ENST00000584275 78 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P09429 OR7E18P-201ENST00000592589 702 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HMGB1P09429 AC020910.2-201ENST00000603635 610 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 AC020910.3-201ENST00000603701 874 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 AL451044.1-201ENST00000604867 238 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P09429 AL022401.1-201ENST00000619498 108 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.72□□□□□ -1.49
HMGB1P09429 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P09429 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P09429 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB1P09429 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HMGB1P09429 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
HMGB1P09429 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB1P09429 INTS6P1-201ENST00000504674 2530 ntBASIC5.72□□□□□ -1.49
HMGB1P09429 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB1P09429 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMGB1P09429 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
HMGB1P09429 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMGB1P09429 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.71□□□□□ -1.49
HMGB1P09429 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMGB1P09429 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
HMGB1P09429 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMGB1P09429 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMGB1P09429 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P09429 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P09429 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P09429 AC106754.1-201ENST00000562632 1513 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P09429 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGB1P09429 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P09429 OR51B3P-201ENST00000412287 913 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 RPL36AP10-201ENST00000421785 322 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGB1P09429 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGB1P09429 MTND4LP10-201ENST00000435146 291 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P09429 AC004938.1-201ENST00000438468 308 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 HMGB1P12-201ENST00000438594 598 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGB1P09429 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGB1P09429 OTX2P1-201ENST00000450956 354 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGB1P09429 USP9YP34-201ENST00000453983 808 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 ANP32BP2-201ENST00000454525 545 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 CYCSP34-201ENST00000458172 304 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 AC026410.2-201ENST00000460281 156 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 RPL21P104-201ENST00000464143 478 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 RPL7AP6-201ENST00000477943 801 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 ARL4AP1-201ENST00000503220 705 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 NDUFB4P9-201ENST00000511646 388 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 MTCO2P32-201ENST00000514865 403 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 SCARNA21.2-201ENST00000516600 166 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 AC104986.1-201ENST00000517978 436 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGB1P09429 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGB1P09429 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.71□□□□□ -1.5
HMGB1P09429 HIGD1AP17-201ENST00000554576 276 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P09429 AC011468.4-201ENST00000603942 409 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 AC243773.3-201ENST00000613270 256 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 AC016769.4-201ENST00000616893 535 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 AC009237.17-201ENST00000618111 748 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P09429 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HMGB1P09429 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGB1P09429 AP002907.1-201ENST00000606361 1430 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P09429 AL049780.3-201ENST00000624612 1583 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P09429 AC109780.1-201ENST00000451768 1344 ntBASIC5.71□□□□□ -1.5
HMGB1P09429 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P09429 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms