Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.93□□□□□ -1.78
RETP07949 AC093716.1-201ENST00000435923 377 ntBASIC3.93□□□□□ -1.78
RETP07949 AL356535.1-201ENST00000440335 398 ntBASIC3.93□□□□□ -1.78
RETP07949 YWHAQP9-201ENST00000445891 512 ntBASIC3.93□□□□□ -1.78
RETP07949 HMGB1P16-201ENST00000447155 540 ntBASIC3.93□□□□□ -1.78
RETP07949 RPL5P24-201ENST00000463742 885 ntBASIC3.93□□□□□ -1.78
RETP07949 RPL9P32-201ENST00000464118 620 ntBASIC3.93□□□□□ -1.78
RETP07949 RPL31P61-201ENST00000496160 376 ntBASIC3.93□□□□□ -1.78
RETP07949 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.93□□□□□ -1.78
RETP07949 RN7SKP18-201ENST00000516005 275 ntBASIC3.93□□□□□ -1.78
RETP07949 AC008802.1-201ENST00000519121 791 ntBASIC3.93□□□□□ -1.78
RETP07949 NDUFA5P2-201ENST00000519723 344 ntBASIC3.93□□□□□ -1.78
RETP07949 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.93□□□□□ -1.78
RETP07949 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.93□□□□□ -1.78
RETP07949 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.93□□□□□ -1.78
RETP07949 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.93□□□□□ -1.78
RETP07949 MTATP6P25-201ENST00000574491 261 ntBASIC3.93□□□□□ -1.78
RETP07949 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.93□□□□□ -1.78
RETP07949 MIMT1-201ENST00000597105 1050 ntBASIC3.93□□□□□ -1.78
RETP07949 AC104662.1-201ENST00000604448 511 ntBASIC3.93□□□□□ -1.78
RETP07949 AC091167.4-201ENST00000605079 184 ntBASIC3.93□□□□□ -1.78
RETP07949 AF001550.2-201ENST00000636643 217 ntBASIC3.93□□□□□ -1.78
RETP07949 AC017002.4-201ENST00000604721 1525 ntBASIC3.93□□□□□ -1.78
RETP07949 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.93□□□□□ -1.78
RETP07949 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.93□□□□□ -1.78
RETP07949 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RETP07949 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RETP07949 AL118496.1-201ENST00000440201 1812 ntBASIC3.93□□□□□ -1.78
RETP07949 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RETP07949 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
RETP07949 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RETP07949 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
RETP07949 OTUD4P1-201ENST00000237841 3067 ntBASIC3.92□□□□□ -1.78
RETP07949 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RETP07949 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RETP07949 RNU6-670P-201ENST00000364312 104 ntBASIC3.92□□□□□ -1.78
RETP07949 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.92□□□□□ -1.78
RETP07949 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.92□□□□□ -1.78
RETP07949 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.92□□□□□ -1.78
RETP07949 DHFRP5-201ENST00000406944 564 ntBASIC3.92□□□□□ -1.78
RETP07949 RNU6-564P-201ENST00000410983 104 ntBASIC3.92□□□□□ -1.78
RETP07949 RFESDP1-201ENST00000422350 461 ntBASIC3.92□□□□□ -1.78
RETP07949 AJ239321.1-201ENST00000424255 564 ntBASIC3.92□□□□□ -1.78
RETP07949 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.92□□□□□ -1.78
RETP07949 AL358472.1-201ENST00000431295 329 ntBASIC3.92□□□□□ -1.78
RETP07949 AL392003.1-201ENST00000434394 243 ntBASIC3.92□□□□□ -1.78
RETP07949 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RETP07949 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
RETP07949 AF228730.2-201ENST00000438784 848 ntBASIC3.92□□□□□ -1.78
RETP07949 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.92□□□□□ -1.78
RETP07949 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.92□□□□□ -1.78
RETP07949 RPL31P20-201ENST00000449593 360 ntBASIC3.92□□□□□ -1.78
RETP07949 RNU6-775P-201ENST00000459318 96 ntBASIC3.92□□□□□ -1.78
RETP07949 TMED11P-201ENST00000479478 690 ntBASIC3.92□□□□□ -1.78
RETP07949 AP001086.1-201ENST00000494882 321 ntBASIC3.92□□□□□ -1.78
RETP07949 ATG10-AS1-201ENST00000504846 648 ntBASIC3.92□□□□□ -1.78
RETP07949 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.92□□□□□ -1.78
RETP07949 RNU1-103P-201ENST00000516502 125 ntBASIC3.92□□□□□ -1.78
RETP07949 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.92□□□□□ -1.78
RETP07949 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.92□□□□□ -1.78
RETP07949 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.92□□□□□ -1.78
RETP07949 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.92□□□□□ -1.78
RETP07949 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.92□□□□□ -1.78
RETP07949 MIR3922-201ENST00000585192 84 ntBASIC3.92□□□□□ -1.78
RETP07949 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.92□□□□□ -1.78
RETP07949 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.92□□□□□ -1.78
RETP07949 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.92□□□□□ -1.78
RETP07949 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.92□□□□□ -1.78
RETP07949 AL133370.2-201ENST00000619934 439 ntBASIC3.92□□□□□ -1.78
RETP07949 MIR3651-201ENST00000630427 90 ntBASIC3.92□□□□□ -1.78
RETP07949 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RETP07949 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RETP07949 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RETP07949 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RETP07949 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RETP07949 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.91□□□□□ -1.78
RETP07949 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RETP07949 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RETP07949 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RETP07949 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RETP07949 RNU6-1251P-201ENST00000364502 107 ntBASIC3.91□□□□□ -1.78
RETP07949 RNA5SP267-201ENST00000364893 126 ntBASIC3.91□□□□□ -1.78
RETP07949 SNORD3H-201ENST00000384486 214 ntBASIC3.91□□□□□ -1.78
RETP07949 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RETP07949 AC007066.1-201ENST00000392902 381 ntBASIC3.91□□□□□ -1.78
RETP07949 AC240504.1-201ENST00000395709 845 ntBASIC3.91□□□□□ -1.78
RETP07949 TRGV6-201ENST00000417928 299 ntBASIC3.91□□□□□ -1.78
RETP07949 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.91□□□□□ -1.78
RETP07949 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.91□□□□□ -1.78
RETP07949 USP12PY-201ENST00000427677 1064 ntBASIC3.91□□□□□ -1.78
RETP07949 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.91□□□□□ -1.78
RETP07949 OR4F13P-201ENST00000428478 931 ntBASIC3.91□□□□□ -1.78
RETP07949 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RETP07949 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.91□□□□□ -1.78
RETP07949 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.91□□□□□ -1.78
RETP07949 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.91□□□□□ -1.78
RETP07949 XKRYP6-201ENST00000440468 1116 ntBASIC3.91□□□□□ -1.78
RETP07949 XKRYP3-201ENST00000442113 1116 ntBASIC3.91□□□□□ -1.78
RETP07949 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.91□□□□□ -1.78
RETP07949 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms