Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MRPL53P1-201ENST00000414323 319 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC083875.1-201ENST00000419509 405 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.11□□□□□ -1.59
CNOT4O95628 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.11□□□□□ -1.59
CNOT4O95628 AC007394.1-201ENST00000421941 531 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AL953862.1-201ENST00000423016 168 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 MTCO1P20-201ENST00000425366 358 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.11□□□□□ -1.59
CNOT4O95628 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 AC073410.1-201ENST00000435125 589 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AL627308.1-201ENST00000435693 821 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 AC093019.1-201ENST00000443135 252 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 RPL7P59-201ENST00000447700 943 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 RPL26P28-201ENST00000451325 435 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.11□□□□□ -1.59
CNOT4O95628 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 RPS20P24-201ENST00000457473 361 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 RN7SL610P-201ENST00000463845 291 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 HMGN1P12-201ENST00000499125 195 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.11□□□□□ -1.59
CNOT4O95628 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 AC021678.1-201ENST00000505195 936 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 HMGB1P29-201ENST00000505659 499 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC114786.4-201ENST00000508771 728 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 AC108064.1-201ENST00000513791 460 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.11□□□□□ -1.59
CNOT4O95628 AF186190.1-201ENST00000517470 480 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 AF279873.1-201ENST00000523393 313 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.11□□□□□ -1.59
CNOT4O95628 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 AC090424.1-201ENST00000535243 736 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.11□□□□□ -1.59
CNOT4O95628 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.11□□□□□ -1.59
CNOT4O95628 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.11□□□□□ -1.59
CNOT4O95628 MTCO3P13-201ENST00000577757 781 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.11□□□□□ -1.59
CNOT4O95628 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 AC103792.1-201ENST00000603591 919 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC112191.3-201ENST00000604371 277 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNOT4O95628 AL009028.1-201ENST00000604895 802 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC069304.2-201ENST00000605154 435 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 MIR6798-201ENST00000612887 67 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 MLECP1-201ENST00000615893 709 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC009159.1-201ENST00000618386 642 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNOT4O95628 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 AC010338.1-201ENST00000621823 717 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AC068880.5-201ENST00000624331 290 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 PCAT14-202ENST00000627127 3935 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 AL157700.1-201ENST00000561973 1432 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNOT4O95628 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CNOT4O95628 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNOT4O95628 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNOT4O95628 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CNOT4O95628 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNOT4O95628 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CNOT4O95628 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CNOT4O95628 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNOT4O95628 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNOT4O95628 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CNOT4O95628 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CNOT4O95628 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CNOT4O95628 Y_RNA.25-201ENST00000362528 102 ntBASIC5.1□□□□□ -1.59
CNOT4O95628 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.1□□□□□ -1.59
CNOT4O95628 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CNOT4O95628 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CNOT4O95628 RPS20P15-201ENST00000412792 311 ntBASIC5.1□□□□□ -1.59
CNOT4O95628 FCF1P2-201ENST00000415284 583 ntBASIC5.1□□□□□ -1.59
CNOT4O95628 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.1□□□□□ -1.59
CNOT4O95628 USP9YP27-201ENST00000418455 438 ntBASIC5.1□□□□□ -1.59
CNOT4O95628 AC092651.1-201ENST00000426110 312 ntBASIC5.1□□□□□ -1.59
CNOT4O95628 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNOT4O95628 AL590399.2-201ENST00000427536 309 ntBASIC5.1□□□□□ -1.59
CNOT4O95628 RPL7P56-201ENST00000429441 717 ntBASIC5.1□□□□□ -1.59
CNOT4O95628 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.1□□□□□ -1.59
CNOT4O95628 CEACAMP1-201ENST00000434624 1035 ntBASIC5.1□□□□□ -1.59
CNOT4O95628 RPL7P11-201ENST00000437586 658 ntBASIC5.1□□□□□ -1.59
CNOT4O95628 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.1□□□□□ -1.59
CNOT4O95628 RABEPKP1-201ENST00000440529 1026 ntBASIC5.1□□□□□ -1.59
CNOT4O95628 FRG2FP-204ENST00000453982 852 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms