Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 BRDTP1-201ENST00000605735 677 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN9O95484 ZYXP1-201ENST00000617638 118 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN9O95484 AC073530.2-201ENST00000623987 261 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN9O95484 FRG1DP-201ENST00000635586 771 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN9O95484 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CLDN9O95484 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN9O95484 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLDN9O95484 AP001486.2-201ENST00000561652 5113 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN9O95484 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CLDN9O95484 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.71□□□□□ -1.81
CLDN9O95484 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
CLDN9O95484 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN9O95484 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN9O95484 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN9O95484 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
CLDN9O95484 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN9O95484 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN9O95484 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN9O95484 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.71□□□□□ -1.82
CLDN9O95484 MIR1183-201ENST00000408856 89 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 RNA5SP239-201ENST00000410218 129 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 AC023128.2-201ENST00000420880 1223 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 MORF4L1P7-201ENST00000426038 703 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 FAR1P1-201ENST00000427163 934 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 MTCO3P43-201ENST00000440974 771 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN9O95484 RPS27P5-201ENST00000444247 244 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN9O95484 AC044797.1-201ENST00000445744 679 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 AC114755.5-201ENST00000447760 831 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN9O95484 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN9O95484 RN7SL93P-201ENST00000463035 293 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 AC010307.1-201ENST00000467206 836 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 AC018635.1-201ENST00000468292 1030 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 AC084198.1-201ENST00000477747 402 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 OR52A4P-202ENST00000481634 799 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 RPS4XP15-201ENST00000489210 795 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN9O95484 AC092045.1-201ENST00000495716 1231 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 IGHV3-32-201ENST00000519182 355 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CLDN9O95484 AC139103.1-201ENST00000534696 1030 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 AC092747.2-201ENST00000545069 983 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN9O95484 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN9O95484 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN9O95484 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN9O95484 AL137849.1-201ENST00000604767 169 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 uc_338.32-201ENST00000615087 172 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN9O95484 MIR6500-201ENST00000622700 86 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN9O95484 AC083899.2-201ENST00000423285 1376 ntBASIC3.71□□□□□ -1.82
CLDN9O95484 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN9O95484 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN9O95484 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLDN9O95484 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
CLDN9O95484 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN9O95484 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLDN9O95484 HSPE1P8-201ENST00000406997 288 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 RNA5SP317-201ENST00000410176 116 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 RNA5SP311-201ENST00000411290 116 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 PRELID3BP11-201ENST00000414230 479 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN9O95484 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN9O95484 AC008065.1-201ENST00000428525 348 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 RPS27AP12-201ENST00000429552 465 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 OR4C10P-201ENST00000434991 931 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN9O95484 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN9O95484 MTCO3P20-201ENST00000454926 688 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 RPL21P71-201ENST00000465598 459 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 AC020898.1-201ENST00000474167 787 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 RPL21P129-201ENST00000491732 478 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN9O95484 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN9O95484 AC020593.1-201ENST00000507399 299 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 RNA5SP315-201ENST00000516340 116 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 RNA5SP164-201ENST00000516533 110 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 RNA5SP312-201ENST00000517068 116 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN9O95484 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN9O95484 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN9O95484 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN9O95484 AL731537.2-201ENST00000561565 951 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 AC120057.2-201ENST00000571520 271 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.7□□□□□ -1.82
CLDN9O95484 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN9O95484 AC005255.1-201ENST00000593748 216 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN9O95484 MIR92B-201ENST00000607575 96 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 AL354760.1-201ENST00000608357 643 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms