Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TO15178 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.15□□□□□ -1.75
TO15178 RNA5SP151-201ENST00000365632 117 ntBASIC4.15□□□□□ -1.75
TO15178 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.15□□□□□ -1.75
TO15178 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
TO15178 MIR153-1-201ENST00000384914 90 ntBASIC4.15□□□□□ -1.75
TO15178 SNORA11B-201ENST00000408175 129 ntBASIC4.15□□□□□ -1.75
TO15178 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.15□□□□□ -1.75
TO15178 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.15□□□□□ -1.75
TO15178 AC069213.2-201ENST00000420238 366 ntBASIC4.15□□□□□ -1.75
TO15178 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.15□□□□□ -1.75
TO15178 AC233981.1-201ENST00000423224 461 ntBASIC4.15□□□□□ -1.75
TO15178 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.15□□□□□ -1.75
TO15178 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.15□□□□□ -1.75
TO15178 AL732292.1-201ENST00000426692 226 ntBASIC4.15□□□□□ -1.75
TO15178 RPL23AP25-201ENST00000430973 463 ntBASIC4.15□□□□□ -1.75
TO15178 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.15□□□□□ -1.75
TO15178 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.15□□□□□ -1.75
TO15178 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.15□□□□□ -1.75
TO15178 USP9YP22-201ENST00000438971 294 ntBASIC4.15□□□□□ -1.75
TO15178 ARL2BPP10-201ENST00000446487 531 ntBASIC4.15□□□□□ -1.75
TO15178 Z73417.1-201ENST00000447373 778 ntBASIC4.15□□□□□ -1.75
TO15178 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.15□□□□□ -1.75
TO15178 Z99714.1-201ENST00000450463 807 ntBASIC4.15□□□□□ -1.75
TO15178 AC012671.1-201ENST00000451912 203 ntBASIC4.15□□□□□ -1.75
TO15178 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.15□□□□□ -1.75
TO15178 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.15□□□□□ -1.75
TO15178 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.15□□□□□ -1.75
TO15178 RPS29P33-201ENST00000456717 146 ntBASIC4.15□□□□□ -1.75
TO15178 RPL21P103-201ENST00000479921 488 ntBASIC4.15□□□□□ -1.75
TO15178 RN7SL817P-201ENST00000480777 288 ntBASIC4.15□□□□□ -1.75
TO15178 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.15□□□□□ -1.75
TO15178 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.15□□□□□ -1.75
TO15178 AK3P4-201ENST00000504283 583 ntBASIC4.15□□□□□ -1.75
TO15178 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.15□□□□□ -1.75
TO15178 RNU6-202P-201ENST00000515998 96 ntBASIC4.15□□□□□ -1.75
TO15178 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.15□□□□□ -1.75
TO15178 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.15□□□□□ -1.75
TO15178 AC074029.1-201ENST00000552531 1044 ntBASIC4.15□□□□□ -1.75
TO15178 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.15□□□□□ -1.75
TO15178 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.15□□□□□ -1.75
TO15178 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.15□□□□□ -1.75
TO15178 AGGF1P6-201ENST00000569213 976 ntBASIC4.15□□□□□ -1.75
TO15178 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.15□□□□□ -1.75
TO15178 AC090181.2-201ENST00000602975 672 ntBASIC4.15□□□□□ -1.75
TO15178 AP002360.3-201ENST00000607673 710 ntBASIC4.15□□□□□ -1.75
TO15178 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.15□□□□□ -1.75
TO15178 AC024257.5-201ENST00000612739 531 ntBASIC4.15□□□□□ -1.75
TO15178 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TO15178 AL158163.2-201ENST00000619110 700 ntBASIC4.15□□□□□ -1.75
TO15178 AP000346.3-201ENST00000622821 210 ntBASIC4.15□□□□□ -1.75
TO15178 AC006065.6-201ENST00000625201 545 ntBASIC4.15□□□□□ -1.75
TO15178 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.15□□□□□ -1.75
TO15178 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TO15178 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.15□□□□□ -1.75
TO15178 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TO15178 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TO15178 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TO15178 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.15□□□□□ -1.75
TO15178 MTND4P8-201ENST00000514997 1362 ntBASIC4.14□□□□□ -1.75
TO15178 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TO15178 RAD17P1-201ENST00000418130 2042 ntBASIC4.14□□□□□ -1.75
TO15178 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TO15178 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TO15178 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.14□□□□□ -1.75
TO15178 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.14□□□□□ -1.75
TO15178 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.14□□□□□ -1.75
TO15178 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TO15178 Z99496.1-201ENST00000469424 1477 ntBASIC4.14□□□□□ -1.75
TO15178 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TO15178 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TO15178 NACA3P-201ENST00000359690 648 ntBASIC4.14□□□□□ -1.75
TO15178 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TO15178 MIR217-201ENST00000384817 110 ntBASIC4.14□□□□□ -1.75
TO15178 MIR3074-201ENST00000384885 81 ntBASIC4.14□□□□□ -1.75
TO15178 RNA5SP332-201ENST00000391063 115 ntBASIC4.14□□□□□ -1.75
TO15178 CEACAMP8-201ENST00000413902 580 ntBASIC4.14□□□□□ -1.75
TO15178 RAC1P3-201ENST00000416129 580 ntBASIC4.14□□□□□ -1.75
TO15178 HIGD1AP15-201ENST00000416198 280 ntBASIC4.14□□□□□ -1.75
TO15178 AC004448.2-201ENST00000422360 586 ntBASIC4.14□□□□□ -1.75
TO15178 RPS27AP7-201ENST00000422792 455 ntBASIC4.14□□□□□ -1.75
TO15178 RPL7AP25-201ENST00000423357 805 ntBASIC4.14□□□□□ -1.75
TO15178 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.14□□□□□ -1.75
TO15178 RPEP3-201ENST00000425462 676 ntBASIC4.14□□□□□ -1.75
TO15178 RPS12P10-201ENST00000427031 377 ntBASIC4.14□□□□□ -1.75
TO15178 Z93242.1-201ENST00000427102 353 ntBASIC4.14□□□□□ -1.75
TO15178 AC092393.1-201ENST00000439625 742 ntBASIC4.14□□□□□ -1.75
TO15178 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TO15178 ELOCP13-201ENST00000443934 329 ntBASIC4.14□□□□□ -1.75
TO15178 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.14□□□□□ -1.75
TO15178 VN1R32P-201ENST00000452234 905 ntBASIC4.14□□□□□ -1.75
TO15178 HMGN3P1-201ENST00000453847 193 ntBASIC4.14□□□□□ -1.75
TO15178 RPS15AP1-201ENST00000457423 391 ntBASIC4.14□□□□□ -1.75
TO15178 PNPLA4P1-201ENST00000458328 305 ntBASIC4.14□□□□□ -1.75
TO15178 AC053481.1-201ENST00000467217 306 ntBASIC4.14□□□□□ -1.75
TO15178 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.14□□□□□ -1.75
TO15178 AC025445.1-201ENST00000502728 300 ntBASIC4.14□□□□□ -1.75
TO15178 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.14□□□□□ -1.75
TO15178 KRT19P6-201ENST00000510983 209 ntBASIC4.14□□□□□ -1.75
TO15178 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms