Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC243654.2-201ENST00000612843 443 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AC005344.1-201ENST00000613391 459 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AL121772.2-201ENST00000614331 297 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AC139769.3-201ENST00000618383 175 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 MIR4727-201ENST00000622232 55 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AC093875.1-201ENST00000623688 504 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AF001550.2-201ENST00000636643 217 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 U6.107-201ENST00000637108 79 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AC022893.2-201ENST00000564832 3296 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 MTCO1P18-201ENST00000455518 1419 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 MIR200C-201ENST00000384980 68 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 UBE2V1P11-201ENST00000411559 285 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC004552.1-201ENST00000419089 348 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 RPL7P29-201ENST00000437151 728 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 RPL21P18-201ENST00000469899 480 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 RPS26P3-201ENST00000470205 348 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC090543.2-201ENST00000483963 348 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC004057.1-201ENST00000485827 348 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC017037.1-201ENST00000508460 471 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 TRMT10BP1-201ENST00000519377 943 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 IGLVIV-53-201ENST00000520107 367 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC087369.1-201ENST00000520775 996 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC068339.2-201ENST00000534395 618 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC124068.1-201ENST00000563131 678 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC087499.8-201ENST00000578406 226 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC068790.5-201ENST00000602741 355 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 BNIP3P31-201ENST00000604515 566 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AL591424.2-201ENST00000617023 128 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC015726.3-201ENST00000624501 418 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AP004289.2-201ENST00000444413 1457 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 AC100871.1-201ENST00000507871 1456 ntBASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD8-MDP1E9PL57 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 RNA5SP27-201ENST00000363839 119 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 MIR92A2-201ENST00000385299 75 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 SNORA3.3-201ENST00000408712 125 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 SNORA3C-201ENST00000408792 125 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 RAC1P3-201ENST00000416129 580 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 MTND2P15-201ENST00000418575 892 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 RWDD4P2-201ENST00000426392 563 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 RPS24P8-201ENST00000431490 402 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 RPL6P5-201ENST00000445678 828 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AL354710.1-201ENST00000453641 246 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 RPS20P21-201ENST00000466859 343 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 RNA5SP143-201ENST00000516936 115 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 IGKV2-38-201ENST00000517443 247 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 OR4A12P-201ENST00000530847 918 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 POLR2KP1-201ENST00000553226 168 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AC104072.1-201ENST00000568817 668 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 RN7SL622P-201ENST00000585292 275 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 PSMA6P4-201ENST00000603247 718 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms