Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SNORD66.1-201ENST00000391230 76 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AP002784.2-201ENST00000397300 549 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 PRRC2CP1-201ENST00000404428 159 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 VN1R8P-201ENST00000407739 893 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 MIR1179-201ENST00000408703 91 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AMD1P2-201ENST00000412936 992 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AL356095.1-201ENST00000417217 199 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 DEFB130D-201ENST00000426866 237 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 FO393414.1-201ENST00000428697 1184 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AL117339.2-201ENST00000430475 180 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 YWHAEP5-201ENST00000431545 765 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 MRPL50P1-201ENST00000431951 384 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 RPL23AP46-201ENST00000438548 490 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 UBE2V1P5-201ENST00000440070 405 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AC009263.1-201ENST00000441193 1239 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AL096829.2-201ENST00000446582 742 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 RPL37P6-202ENST00000464216 403 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AC073522.1-201ENST00000483312 377 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AF213884.1-201ENST00000488102 463 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AL132838.2-201ENST00000492041 314 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 HMGN1P15-201ENST00000513870 295 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AC099522.1-202ENST00000514718 367 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 RNA5SP73-201ENST00000516744 108 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 RN7SKP234-201ENST00000517173 224 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AC006064.5-201ENST00000541782 248 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AC091515.1-201ENST00000548110 679 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 LLPHP1-201ENST00000603571 367 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AC112503.2-201ENST00000609005 552 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AL359535.1-201ENST00000612100 1087 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AC007546.1-201ENST00000619452 559 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AC092608.3-201ENST00000625017 386 ntBASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
NPIPA2E9PIF3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 RNA5SP130-201ENST00000364431 114 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 RNU6-1293P-201ENST00000384077 107 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 MIR153-1-201ENST00000384914 90 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 RNU2-21P-201ENST00000410368 188 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 RN7SKP33-201ENST00000410942 340 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 USP9YP7-201ENST00000436723 430 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AC092170.1-201ENST00000440211 356 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AL162151.2-201ENST00000448875 158 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 USP9YP32-201ENST00000452432 430 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 ANP32BP2-201ENST00000454525 545 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 SNORD108-201ENST00000459332 71 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 RPS29P19-201ENST00000479709 171 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AC016550.1-201ENST00000505348 785 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AC008885.2-201ENST00000509506 930 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 MTND4LP31-201ENST00000514859 294 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 SERPINE4P-201ENST00000554978 281 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AGGF1P8-201ENST00000562979 1000 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 MTND6P33-201ENST00000571794 183 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AL121834.1-201ENST00000572284 509 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 MIR3908-201ENST00000579798 126 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AC244505.7-201ENST00000599675 272 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 RNU4-89P-201ENST00000607443 133 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AC021851.1-201ENST00000608537 1082 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AC253576.2-201ENST00000618815 580 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 RNU6-156P-201ENST00000621869 107 ntBASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms