Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU6-1004P-201ENST00000516584 111 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 RNU6-347P-201ENST00000516658 105 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 SNORA70.18-201ENST00000516696 98 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AC103833.1-201ENST00000517442 172 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 OR8K2P-201ENST00000524645 927 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AC008083.2-201ENST00000546707 476 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 TRAV15-201ENST00000556680 249 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 BNIP3P22-201ENST00000593399 556 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AC069209.1-201ENST00000619282 651 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AC015967.1-201ENST00000619893 476 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AL732618.1-201ENST00000623251 301 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AL392088.2-201ENST00000637607 285 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 AL365440.1-201ENST00000436135 2167 ntBASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
SMIM28A0A1B0GU29 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 RNA5SP39-201ENST00000411245 120 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 CRYBB2P1-203ENST00000415709 538 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AC245052.5-201ENST00000416320 649 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 MTCO1P52-201ENST00000433928 531 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AC073063.1-201ENST00000434352 607 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AL513321.1-201ENST00000441175 761 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 DNAJC19P1-201ENST00000455312 319 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AC006116.10-201ENST00000591836 581 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AC233280.2-201ENST00000603917 1070 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AL049844.2-201ENST00000604280 628 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AL391834.1-201ENST00000609609 560 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AP004607.9-201ENST00000618202 316 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AC012314.7-201ENST00000619693 93 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AC090617.9-201ENST00000623751 147 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 U6.105-201ENST00000637379 88 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 SAGE2P-201ENST00000420011 2126 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AC114546.3-201ENST00000623582 1734 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 AC024341.1-201ENST00000526444 1552 ntBASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMIM28A0A1B0GU29 MAPK10-373ENST00000641983 6772 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 MIR208A-201ENST00000362287 71 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 TRGV6-201ENST00000417928 299 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 DBIP2-201ENST00000419076 262 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC048351.1-201ENST00000420064 602 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 SDCBPP2-201ENST00000424643 885 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC092447.2-201ENST00000435487 669 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC092641.1-201ENST00000440229 772 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 PRDX3P3-201ENST00000447765 522 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC005229.2-201ENST00000456995 399 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 snoU13.22-201ENST00000459428 104 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 FTH1P24-201ENST00000503502 462 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC108120.2-201ENST00000512973 294 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC103843.2-201ENST00000530523 682 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC092747.2-201ENST00000545069 983 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC093014.1-201ENST00000548926 724 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC022884.3-201ENST00000579571 248 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 MIR3944-201ENST00000581277 108 ntBASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms