Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC103591.2-201ENST00000265259 766 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 FGF7P2-201ENST00000332473 296 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 Y_RNA.505-201ENST00000384489 102 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC016769.3-201ENST00000396562 315 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC007899.1-201ENST00000412776 775 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 RPS7P13-201ENST00000413955 498 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 TPMTP2-201ENST00000414372 726 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 COX5BP7-201ENST00000414780 274 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AL590762.4-201ENST00000425885 253 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 RPL37P21-201ENST00000435890 276 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 LARP1BP3-201ENST00000437229 869 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 CDC27P1-201ENST00000445384 715 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AP000936.2-201ENST00000447151 681 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AL592447.1-201ENST00000447592 540 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC104073.1-201ENST00000451988 151 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 PABPC1P3-201ENST00000469174 459 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC104563.1-201ENST00000476147 376 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC108941.1-201ENST00000502853 530 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 RPS4XP20-201ENST00000505751 772 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC022861.1-201ENST00000522981 663 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AP004247.1-201ENST00000531556 1289 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 GTF2IP22-201ENST00000554443 182 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC009852.2-201ENST00000567898 485 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC079089.3-201ENST00000603094 673 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC005084.1-201ENST00000605160 304 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AC103591.3-201ENST00000608684 209 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 Mico1.1-201ENST00000611698 204 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 MIR6798-201ENST00000612887 67 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AP000648.2-201ENST00000624182 404 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 PABPC1P9-201ENST00000426076 1612 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 AL034549.2-201ENST00000618285 3373 ntBASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 AC114947.2-201ENST00000565748 2125 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 AC011155.1-201ENST00000316512 456 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 OR5H15-201ENST00000383696 930 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 SNORD56.6-201ENST00000384569 71 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 COX6CP17-201ENST00000421389 185 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 RPL7L1P1-201ENST00000448259 785 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 MTCO1P27-201ENST00000448269 226 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 PRPF38AP1-201ENST00000451976 933 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 HMGB3P21-201ENST00000452483 547 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 RPL5P32-201ENST00000454085 879 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 AC017015.1-201ENST00000477387 286 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 AL049874.2-201ENST00000492636 288 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 IGBP1P4-201ENST00000503202 879 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 AC022447.3-201ENST00000506865 495 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 AC107918.3-201ENST00000533272 382 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 AC027369.5-201ENST00000533838 755 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 AC024940.3-201ENST00000538551 316 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 AC092470.1-201ENST00000546187 132 ntBASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA6Q9Y5G7 OR11J2P-201ENST00000555298 907 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms