Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AL009174.1-201ENST00000426577 416 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC006466.1-201ENST00000438721 289 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC092393.1-201ENST00000439625 742 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AL133217.1-201ENST00000450980 425 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC006967.1-201ENST00000467608 589 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 RPL7P16-201ENST00000479738 738 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC093270.2-201ENST00000486157 792 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 RPS23P1-201ENST00000491662 432 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC082651.2-201ENST00000496833 166 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC104108.1-201ENST00000509930 412 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 FABP5P12-201ENST00000515543 389 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 SNORA3.4-201ENST00000515969 96 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 RNA5SP497-201ENST00000516081 97 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 OR5AZ1P-201ENST00000527448 943 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 BRD9P1-201ENST00000529855 560 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 OR4C2P-201ENST00000530855 1064 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC044913.1-201ENST00000557200 430 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 NIFKP8-201ENST00000560500 874 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 CYP4A43P-201ENST00000568156 121 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC135628.1-201ENST00000568867 534 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 ELOCP28-201ENST00000590044 317 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 VN1R84P-201ENST00000593697 235 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AL133338.2-201ENST00000604292 736 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AL022161.1-201ENST00000604390 213 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AL451064.1-201ENST00000607718 471 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC245008.1-201ENST00000608123 476 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC133644.2-201ENST00000608142 540 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 OR6R2P-201ENST00000609216 300 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC023158.2-201ENST00000614876 543 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC131159.1-201ENST00000621854 213 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 MIR3974-201ENST00000637126 96 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 MTND4P26-201ENST00000415971 1359 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AC096656.1-201ENST00000623826 1364 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 KARSP3-201ENST00000571212 1504 ntBASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.83□□□□□ -1.8
MRPS28Q9Y2Q9 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 AC012020.1-201ENST00000624541 1728 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 AC021146.4-201ENST00000309229 279 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 AL590240.1-201ENST00000334118 313 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 RNA5SP52-201ENST00000362448 134 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 RN7SKP103-201ENST00000363848 320 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 Y_RNA.192-201ENST00000363977 102 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 RNU6-619P-201ENST00000365146 108 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 RNU6-157P-201ENST00000383957 107 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 MIR1303-201ENST00000408625 86 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 RN7SKP100-201ENST00000411258 284 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 AL160275.2-201ENST00000412010 394 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 RPS23P10-201ENST00000416185 486 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 RPL7P44-201ENST00000424827 742 ntBASIC3.82□□□□□ -1.8
MRPS28Q9Y2Q9 PRELID3BP10-201ENST00000431957 584 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms