Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 Y_RNA.353-201ENST00000365440 108 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 Y_RNA.398-201ENST00000383952 99 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 MIR517A-201ENST00000385001 87 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 SNORA16.2-201ENST00000390991 127 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 RN7SKP51-201ENST00000410781 304 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 EIF4EP2-201ENST00000422816 654 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 PSMA2P3-201ENST00000429685 675 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 RPL23AP15-201ENST00000450202 459 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 SCARNA6-201ENST00000515982 265 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 IGLVIV-64-201ENST00000518581 301 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 AP003084.1-201ENST00000524828 742 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 AC036111.2-201ENST00000533247 901 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 AC126177.3-201ENST00000551839 688 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 AC091304.5-201ENST00000568969 158 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 AC022884.3-201ENST00000579571 248 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 MIR5010-201ENST00000582846 120 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 AC104465.1-201ENST00000611365 139 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 BX005040.2-201ENST00000620504 370 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 SPATA31C1-201ENST00000420021 3895 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 RBPJP6-201ENST00000411556 1431 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AL138713.1-201ENST00000624026 2130 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 NCOA4P3-201ENST00000513203 1877 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 RNU6-317P-201ENST00000384031 107 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 MIR628-201ENST00000385229 95 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 SNORA53-201ENST00000391141 249 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 CYP4F34P-201ENST00000425951 481 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 NIP7P1-201ENST00000433227 512 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AC019185.3-201ENST00000438805 323 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AC073476.1-201ENST00000452854 407 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AC114755.1-201ENST00000453101 868 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 RPL36AP13-201ENST00000457490 317 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 OARD1-209ENST00000471367 401 ntTSL 2 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AC016559.2-201ENST00000510759 359 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 RNA5SP518-201ENST00000515957 119 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 RANP3-201ENST00000530970 276 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 NDUFA3P2-201ENST00000531434 232 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 DLEU1_1.1-201ENST00000618107 190 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AL589993.1-201ENST00000407450 2524 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AC132219.2-201ENST00000624416 2327 ntBASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms