Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 OR6C64P-201ENST00000419708 825 ntBASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 AC074367.1-201ENST00000438685 1125 ntBASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 AC010486.1-201ENST00000511793 424 ntBASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 AC008885.1-201ENST00000514930 301 ntBASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 AC026333.2-201ENST00000542164 106 ntBASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PHRF1Q9P1Y6 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 HSPA8P17-201ENST00000427029 1382 ntBASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 AC002075.2-201ENST00000425207 252 ntBASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 AC233982.1-201ENST00000451247 436 ntBASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 AC099560.2-201ENST00000457554 255 ntBASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 RPS3AP50-201ENST00000487064 803 ntBASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 MIR3945-201ENST00000581853 98 ntBASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 OR1AB1P-201ENST00000585564 761 ntBASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 AC068647.1-201ENST00000489539 2265 ntBASIC4.49□□□□□ -1.69
PHRF1Q9P1Y6 AC083843.2-201ENST00000568248 6253 ntBASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 MTND4P22-201ENST00000413116 1169 ntBASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 AL353678.1-201ENST00000422735 741 ntBASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 AC100793.4-201ENST00000613683 429 ntBASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 AL359715.5-201ENST00000623431 443 ntBASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.48□□□□□ -1.69
PHRF1Q9P1Y6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 RNU4-47P-201ENST00000410876 114 ntBASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 AC013412.1-201ENST00000610687 192 ntBASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PHRF1Q9P1Y6 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 HSPE1P8-201ENST00000406997 288 ntBASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 RPS29P26-201ENST00000477483 171 ntBASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 OR4R3P-201ENST00000525084 838 ntBASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 AC006557.5-201ENST00000603126 811 ntBASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 MIR4727-201ENST00000622232 55 ntBASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 BMS1P21-201ENST00000634565 365 ntBASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
PHRF1Q9P1Y6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms