Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL050321.1-201ENST00000432363 400 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.62□□□□□ -1.83
CISHQ9NSE2 AC008264.1-201ENST00000447612 367 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.62□□□□□ -1.83
CISHQ9NSE2 MRPS31P2-201ENST00000451581 518 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.62□□□□□ -1.83
CISHQ9NSE2 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CISHQ9NSE2 AC112198.1-201ENST00000505369 1220 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 AC107934.2-201ENST00000518653 310 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.62□□□□□ -1.83
CISHQ9NSE2 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.62□□□□□ -1.83
CISHQ9NSE2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.62□□□□□ -1.83
CISHQ9NSE2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.62□□□□□ -1.83
CISHQ9NSE2 AC116447.1-201ENST00000613153 453 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 AL355365.1-201ENST00000616480 294 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.62□□□□□ -1.83
CISHQ9NSE2 OR11H5P-202ENST00000641612 1325 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CISHQ9NSE2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CISHQ9NSE2 AC009313.2-201ENST00000417893 1941 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 AL049781.1-201ENST00000623195 3585 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
CISHQ9NSE2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.61□□□□□ -1.83
CISHQ9NSE2 HSPA8P19-201ENST00000505359 1517 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CISHQ9NSE2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CISHQ9NSE2 AC106871.1-201ENST00000568324 3102 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CISHQ9NSE2 MIR30E-201ENST00000362104 92 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 OR6K3-202ENST00000368146 996 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 AC234772.1-201ENST00000377927 937 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CISHQ9NSE2 RNU6-146P-201ENST00000384602 108 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 MIR670-201ENST00000390142 98 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 SNORA11-201ENST00000408789 128 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 AC126124.2-201ENST00000413542 321 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 AL513174.1-201ENST00000423182 629 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 AL159987.2-201ENST00000432754 307 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 CYCSP43-201ENST00000438233 310 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CISHQ9NSE2 AL354710.1-201ENST00000453641 246 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 AC093663.1-201ENST00000497190 394 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 HMGB1P21-201ENST00000502313 581 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CISHQ9NSE2 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.61□□□□□ -1.83
CISHQ9NSE2 MIR2276-201ENST00000516886 89 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 AC090281.1-201ENST00000523019 276 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.61□□□□□ -1.83
CISHQ9NSE2 AC084757.1-201ENST00000559987 490 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 AC010200.2-201ENST00000605098 235 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CISHQ9NSE2 RPS4XP5-202ENST00000449995 1334 ntBASIC3.61□□□□□ -1.83
CISHQ9NSE2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CISHQ9NSE2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CISHQ9NSE2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CISHQ9NSE2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CISHQ9NSE2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.6□□□□□ -1.83
CISHQ9NSE2 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CISHQ9NSE2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CISHQ9NSE2 RNU6-1331P-201ENST00000363658 106 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 RNU1-85P-201ENST00000364127 164 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.6□□□□□ -1.83
CISHQ9NSE2 MIR183-201ENST00000384958 110 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 BX323014.1-201ENST00000412876 237 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 RANP4-201ENST00000413361 655 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.6□□□□□ -1.83
CISHQ9NSE2 AL356968.1-201ENST00000416622 474 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.6□□□□□ -1.83
CISHQ9NSE2 RPL23AP82-202ENST00000427528 469 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CISHQ9NSE2 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.6□□□□□ -1.83
CISHQ9NSE2 CYCSP35-201ENST00000451978 304 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.6□□□□□ -1.83
CISHQ9NSE2 CENPBD1P1-201ENST00000464061 469 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 AC008155.2-201ENST00000464337 397 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.6□□□□□ -1.83
CISHQ9NSE2 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.6□□□□□ -1.83
CISHQ9NSE2 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CISHQ9NSE2 AC109635.6-201ENST00000525487 1113 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.6□□□□□ -1.83
CISHQ9NSE2 AC005476.1-201ENST00000554427 397 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.6□□□□□ -1.83
CISHQ9NSE2 MIR4425-201ENST00000580572 84 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CISHQ9NSE2 AC008739.3-201ENST00000603262 127 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 uc_338.32-201ENST00000615087 172 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 AC015967.1-201ENST00000619893 476 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 AC000123.2-201ENST00000623124 461 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 U6.105-201ENST00000637379 88 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.6□□□□□ -1.83
CISHQ9NSE2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.6□□□□□ -1.83
CISHQ9NSE2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.6□□□□□ -1.83
CISHQ9NSE2 CR383658.2-201ENST00000547576 1525 ntBASIC3.6□□□□□ -1.83
CISHQ9NSE2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CISHQ9NSE2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CISHQ9NSE2 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CISHQ9NSE2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms