Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 CYCSP22-201ENST00000517555 339 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC027309.2-201ENST00000520566 192 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 MRPS16P1-201ENST00000523462 412 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 OR5AN2P-201ENST00000534535 896 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 HIF1AP1-201ENST00000553642 175 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC087283.1-201ENST00000604029 1074 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 RNU6-84P-201ENST00000607737 102 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 Z95327.3-201ENST00000610385 572 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 RNA5SP440-201ENST00000612665 119 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 MIR6862-1-201ENST00000613016 70 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 MIR6862-2-201ENST00000614755 70 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 MIR6729-201ENST00000618194 65 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC090574.1-201ENST00000623186 233 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC139792.3-201ENST00000623525 224 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC245100.2-201ENST00000454544 1679 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 ICE2P1-201ENST00000512800 1849 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC068870.3-201ENST00000625077 2536 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AL022322.2-201ENST00000624072 20397 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 DBF4P1-201ENST00000412976 1892 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 CASC19-221ENST00000641309 1382 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 RNA5SP242-201ENST00000364171 118 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AL009179.1-201ENST00000406085 265 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 RNU6-272P-201ENST00000411028 104 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC017078.1-201ENST00000416146 368 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 RAD23BP1-201ENST00000421404 1227 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 NPM1P22-201ENST00000427761 952 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 HSPD1P12-201ENST00000429127 1069 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 RPL31P35-201ENST00000431058 377 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC109583.1-201ENST00000432156 268 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 SDCBPP1-201ENST00000440192 890 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 TRGVB-201ENST00000453257 471 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 MTCO1P42-201ENST00000457379 726 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 SNORD125-201ENST00000459538 96 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 RN7SL72P-201ENST00000460697 269 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC023598.1-201ENST00000472521 361 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC109481.1-201ENST00000509173 282 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 IGLV3-24-201ENST00000517477 197 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AP000790.1-201ENST00000528891 737 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC122688.1-201ENST00000541494 223 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC010547.6-201ENST00000571789 193 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 MIR4311-201ENST00000580794 100 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 HMGN1P30-201ENST00000589286 268 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 RPL12P25-202ENST00000598100 674 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 NRBF2P5-201ENST00000603087 788 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 YWHAQP7-201ENST00000603536 658 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 AC241377.1-201ENST00000619797 406 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 PISRT1-201ENST00000626175 531 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 SAMMSON-227ENST00000642114 1199 ntBASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms